Job Description P0A0J3 Confidence 99.97% Date Tue Jul 17 17:05:07 BST 2012 Rank 56 Aligned Residues 90 % Identity 53% Template d1gv3a1 SCOP info Long alpha-hairpin Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), N-terminal domain Resolution 2.0

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		M	A	F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	.	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		N	P	A	E	L	P	P	L	P	Y	G	Y	D	A	L	E	K	A	I	D	A	E	T	M	K	L	H	H	D	K	H	H	A	A	Y	V	N	N	L	N	N	A	L	K	K	H	P	E	L	Q	N	S	S	V	E	A	L	L	R	D	L	N	S	V	P	E	D	I	R	T	T	V	R	N	N	G	G	G	H	L
Template Known Secondary structure		T	T							S	S		T	T	T	T	T	T	T	S											T															T		G	G	G	G	G	S								T	G	G	G	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	S	L	F	W	E	L	L	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	T	I	F	W	Q	I	M	S	P
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions