Job Description P0A0J3 Confidence 100.00% Date Tue Jul 17 17:05:07 BST 2012 Rank 31 Aligned Residues 188 % Identity 37% Template c2cw3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:iron superoxide dismutase; PDBTitle: x-ray structure of pmsod2, superoxide dismutase from2 perkinsus marinus Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L	N	H
Query Conservation
Alig confidence							.																																									.											.	.	.
Template Conservation							.																																									.											.	.	.
Template Sequence		G	L	R	M	T	.	L	P	Y	G	L	E	A	L	E	P	V	I	S	A	A	T	V	D	F	H	Y	N	K	H	H	Q	G	Y	I	Q	K	L	L	D	A	T	G	L	P	E	.	S	R	I	N	L	K	S	L	V	T	.	.	.	L	G	P	D	R	A	G	E	N	V	F	N	A	A	G	Q	I	Y	N	H
Template Known Secondary structure		S	S				.		S	S		T	T	T	T	T	T	T	S											T																	G	.	G	G									.	.	.
Template Predicted Secondary structure							.																																									.											.	.	.
Template SS confidence
		7	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.
Predicted Secondary structure														.	.	.	.																																										.	.																			.	.
Query SS confidence														.	.	.	.																																										.	.																			.	.
Query Sequence		S	L	F	W	E	L	L	S	P	N	S	E	.	.	.	.	E	K	G	T	V	V	E	K	I	K	E	Q	W	G	S	L	E	E	F	K	K	E	F	A	D	K	A	A	A	R	F	G	S	G	W	A	W	L	V	V	N	.	.	N	G	Q	L	E	I	V	T	T	P	N	Q	D	N	P	L	T	E	.	.	G
Query Conservation														.	.	.	.																																										.	.																			.	.
Alig confidence														.	.	.	.																																										.	.																			.	.
Template Conservation
Template Sequence		N	M	Y	W	L	S	M	V	P	T	S	G	S	G	R	H	V	P	P	R	L	L	K	L	I	R	A	R	W	G	N	V	D	E	M	K	E	N	F	M	R	K	A	T	A	L	F	G	S	G	W	I	W	L	V	W	D	T	R	E	R	R	L	D	L	V	G	T	K	D	A	H	S	P	L	S	E	D	A	G
Template Known Secondary structure							T	B			T	T					S														S	S																	S	S									T	T	T	T									T	T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	P	I	L	G	L	D	V	W	E	H	A	Y	Y	L	K	Y	Q	N	K	R	P	D	Y	I	G	A	F	W	N	V	V	N	W	E	K	V	D	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	P	L	F	T	C	D	V	W	E	H	A	Y	Y	L	D	Y	Q	H	D	R	A	A	Y	L	T	R	W	W	S	L	I	N	W	E	F	A	D	S	N
Template Known Secondary structure											S	G	G	G	T					T	T											T	T	B								T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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