Job Description P0A0J3 Confidence 100.00% Date Tue Jul 17 17:05:07 BST 2012 Rank 11 Aligned Residues 191 % Identity 41% Template c2cw2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase 1; PDBTitle: crystal structure of superoxide dismutase from p. marinus Resolution 1.86 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	.	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L	N
Query Conservation																																															.
Alig confidence																																															.																	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		P	F	Q	C	P	P	L	P	Y	V	K	N	A	L	E	P	H	M	S	A	E	T	L	T	Y	H	H	D	K	H	H	Q	T	Y	V	D	T	L	N	S	I	A	A	E	N	S	T	I	A	S	K	T	L	E	Q	I	I	K	T	E	T	G	.	.	.	.	.	.	.	K	P	F	N	Q	A	A	Q	V	Y	N
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	S											T																					T	S												.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		H	S	L	F	W	E	L	L	S	P	N	S	E	.	.	E	K	G	T	V	V	E	K	I	K	E	Q	W	G	S	L	E	E	F	K	K	E	F	A	D	K	A	A	A	R	F	G	S	G	W	A	W	L	V	V	N	N	G	Q	L	E	I	V	T	T	P	N	Q	D	N	P	L	T	E	G	K	T	P	I	L
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		H	T	F	F	F	N	N	L	A	P	N	G	G	G	E	P	T	G	K	I	A	E	L	I	T	R	D	F	G	S	F	E	K	F	K	E	D	F	S	A	A	A	V	G	H	F	G	S	G	W	V	W	L	I	A	D	D	G	K	L	K	I	V	Q	G	H	D	A	G	N	P	I	R	E	S	K	T	P	L	M
Template Known Secondary structure								T	B		T	T			S	S														S	S																	S	S									T	T									T	T			G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	V	W	E	H	A	Y	Y	L	K	Y	Q	N	K	R	P	D	Y	I	G	A	F	W	N	V	V	N	W	E	K	V	D	E	L	Y	N	A	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	D	V	W	E	H	A	Y	Y	I	D	Y	R	N	A	R	A	Q	Y	V	K	N	Y	W	N	L	V	N	W	D	F	V	N	D	N	V	A	K	A	G
Template Known Secondary structure						S	G	G	G	T					T	T										T	T	T	B													T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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