Job Description P0A0J3 Confidence 100.00% Date Tue Jul 17 17:05:07 BST 2012 Rank 26 Aligned Residues 187 % Identity 45% Template c1qnnD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:superoxide dismutase; PDBTitle: cambialistic superoxide dismutase from porphyromonas2 gingivalis Resolution 1.8 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L	N	H
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		T	H	E	L	I	S	L	P	Y	A	V	D	A	L	A	P	V	I	S	K	E	T	V	E	F	H	H	G	K	H	L	K	T	Y	V	D	N	L	N	K	L	I	I	G	T	E	F	E	N	A	D	L	N	T	I	V	Q	K	S	E	G	.	.	.	.	.	.	.	G	I	F	N	N	A	G	Q	T	L	N	H
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	T											T														T	T	S	T	T	T	T	S												.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																																										.
Query SS confidence														.	.																																										.
Query Sequence		S	L	F	W	E	L	L	S	P	N	S	E	.	.	E	K	G	T	V	V	E	K	I	K	E	Q	W	G	S	L	E	E	F	K	K	E	F	A	D	K	A	A	A	R	F	G	S	G	W	A	W	L	V	V	N	.	N	G	Q	L	E	I	V	T	T	P	N	Q	D	N	P	L	T	E	G	K	T	P	I	L
Query Conservation														.	.																																										.
Alig confidence														.	.																																										.
Template Conservation
Template Sequence		N	L	Y	F	T	Q	F	R	P	G	K	G	G	A	P	K	G	K	L	G	E	A	I	D	K	Q	F	G	S	F	E	K	F	K	E	E	F	N	T	A	G	T	T	L	F	G	S	G	W	V	W	L	A	S	D	A	N	G	K	L	S	I	E	K	E	P	N	A	G	N	P	V	R	K	G	L	N	P	L	L
Template Known Secondary structure						T	T	B		T	T			S															S	S																	S	S									T	T										T	T			G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	V	W	E	H	A	Y	Y	L	K	Y	Q	N	K	R	P	D	Y	I	G	A	F	W	N	V	V	N	W	E	K	V	D	E	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	D	V	W	E	H	A	Y	Y	L	T	Y	Q	N	R	R	A	D	H	L	K	D	L	W	S	I	V	D	W	D	I	V	E	S	R	Y
Template Known Secondary structure						S	G	G	G	T					T	T										G	G	G	B							T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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