Job Description P0A0J3 Confidence 100.00% Date Tue Jul 17 17:05:07 BST 2012 Rank 19 Aligned Residues 193 % Identity 37% Template c1p7gL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of superoxide dismutase from pyrobaculum2 aerophilum Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L	N
Query Conservation
Alig confidence																																																						.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		K	R	Y	T	L	P	P	L	P	Y	A	Y	N	A	L	E	P	Y	I	S	A	E	I	X	Q	L	H	H	Q	K	H	H	Q	G	Y	V	N	G	A	N	A	A	L	E	K	L	E	K	F	R	K	G	.	.	.	.	.	.	E	A	Q	I	D	I	R	A	V	L	R	D	L	S	F	H	L	N	G	H	I	L
Template Known Secondary structure										S	S		T	T	T	T	T	T	T	S											T																					T	T	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure												.	.	.	.																																													.	.
Query SS confidence												.	.	.	.																																													.	.
Query Sequence		H	S	L	F	W	E	L	L	S	P	.	.	.	.	N	S	E	E	K	G	T	V	V	E	K	I	K	E	Q	W	G	S	L	E	E	F	K	K	E	F	A	D	K	A	A	A	R	F	G	S	G	W	A	W	L	V	V	N	.	.	N	G	Q	L	E	I	V	T	T	P	N	Q	D	N	P	L	T	E	G	K
Query Conservation												.	.	.	.																																													.	.
Alig confidence												.	.	.	.																																													.	.
Template Conservation
Template Sequence		H	S	I	F	W	P	N	X	A	P	P	G	K	G	G	G	K	P	G	G	K	I	A	D	L	I	N	K	F	F	G	S	F	E	K	F	K	E	E	F	S	Q	A	A	K	N	V	E	G	V	G	W	A	I	L	V	Y	E	P	L	E	E	Q	L	L	I	L	Q	I	E	K	H	N	L	X	H	A	A	D	A
Template Known Secondary structure						T	T	T	B		S	B	T	T	B		S															S	S														T		S	S	S									T	T	T	T									T	T	T	B	S			T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	I	L	G	L	D	V	W	E	H	A	Y	Y	L	K	Y	Q	N	K	R	P	D	Y	I	G	A	F	W	N	V	V	N	W	E	K	V	D	E	L	Y	N	A	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	L	L	A	L	D	V	W	E	H	A	Y	Y	L	Q	Y	K	N	D	R	G	S	Y	V	D	N	W	W	N	V	V	N	W	D	D	V	E	R	R	L	Q	K	A	L
Template Known Secondary structure										S	G	G	G	T					T	T										G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions