Job Description P0A0J3 Confidence 100.00% Date Tue Jul 17 17:05:07 BST 2012 Rank 15 Aligned Residues 190 % Identity 40% Template c1ma1E_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:superoxide dismutase; PDBTitle: structure and properties of the atypical iron superoxide2 dismutase from methanobacterium thermoautotrophicum Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L	N	H	S
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		Y	E	L	P	E	L	P	Y	P	Y	D	A	L	E	P	H	I	S	R	E	Q	L	T	I	H	H	Q	K	H	H	Q	A	Y	V	D	G	A	N	A	L	L	R	K	L	D	.	.	.	.	.	.	E	A	R	E	S	D	T	D	V	D	I	K	A	A	L	K	E	L	S	F	H	V	G	G	Y	V	L	H	L
Template Known Secondary structure								S	S		T	T	T	T	T	T	T	S											T																		.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																																										.	.
Query SS confidence													.	.	.	.																																										.	.
Query Sequence		L	F	W	E	L	L	S	P	N	S	E	.	.	.	.	E	K	G	T	V	V	E	K	I	K	E	Q	W	G	S	L	E	E	F	K	K	E	F	A	D	K	A	A	A	R	F	G	S	G	W	A	W	L	V	V	N	.	.	N	G	Q	L	E	I	V	T	T	P	N	Q	D	N	P	L	T	E	G	K	T	P
Query Conservation													.	.	.	.																																										.	.
Alig confidence													.	.	.	.																																										.	.
Template Conservation
Template Sequence		F	F	W	G	N	M	G	P	A	D	E	C	G	G	E	P	S	G	K	L	A	E	Y	I	E	K	D	F	G	S	F	E	R	F	R	K	E	F	S	Q	A	A	I	S	A	E	G	S	G	W	A	V	L	T	Y	C	Q	R	T	D	R	L	F	I	M	Q	V	E	K	H	N	V	N	V	I	P	H	F	R	I
Template Known Secondary structure						T	B			T	T	T	S		S															S	S														T		S	S	S									T	T	T	T									T	T	T	B	S			T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	L	D	V	W	E	H	A	Y	Y	L	K	Y	Q	N	K	R	P	D	Y	I	G	A	F	W	N	V	V	N	W	E	K	V	D	E	L	Y	N	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	L	D	V	W	E	H	A	Y	Y	I	D	Y	R	N	V	R	P	D	Y	V	E	A	F	W	N	I	V	N	W	K	E	V	E	K	R	F	E	D	I
Template Known Secondary structure		S						S	G	G	G	T					T	T										T	T	T	B											T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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