Job Description P0A0J3 Confidence 100.00% Date Tue Jul 17 17:05:07 BST 2012 Rank 23 Aligned Residues 194 % Identity 35% Template c1b06A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (superoxide dismutase); PDBTitle: superoxide dismutase from sulfolobus acidocaldarius Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	F	E	L	P	K	L	P	Y	A	F	D	A	L	E	P	H	F	D	K	E	T	M	E	I	H	H	D	R	H	H	N	T	Y	V	T	K	L	N	A	A	V	E	G	T	.	D	L	E	S	K	S	I	E	E	I	V	A	N	L	D	S	V	P	A	N	I	Q	T	A	V	R	N	N	G	G	G	H	L	N
Query Conservation																																															.
Alig confidence																																															.												.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		R	Y	E	F	P	Q	L	P	Y	K	V	D	A	L	E	P	Y	I	S	K	D	I	I	D	V	H	Y	N	G	H	H	K	G	Y	V	N	G	A	N	S	L	L	D	R	L	E	K	L	I	K	G	D	L	P	Q	G	Q	.	.	.	.	Y	D	L	Q	G	I	L	R	G	L	T	F	N	I	N	G	H	K	L
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	S											T																						T	S	S		T	T	S	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure															.	.	.	.																																											.	.
Query SS confidence															.	.	.	.																																											.	.
Query Sequence		H	S	L	F	W	E	L	L	S	P	N	S	E	.	.	.	.	E	K	G	T	V	V	E	K	I	K	E	Q	W	G	S	L	E	E	F	K	K	E	F	A	D	K	A	A	A	R	F	G	S	G	W	A	W	L	V	V	N	N	.	.	G	Q	L	E	I	V	T	T	P	N	Q	D	N	P	L	T	E	G	K
Query Conservation															.	.	.	.																																											.	.
Alig confidence															.	.	.	.																																											.	.
Template Conservation
Template Sequence		H	A	I	Y	W	N	N	M	A	P	A	G	K	G	G	G	K	P	G	G	A	L	A	D	L	I	D	K	Q	Y	G	S	F	D	R	F	K	Q	V	F	S	E	S	A	N	S	L	P	G	S	G	W	T	V	L	Y	Y	D	N	E	S	G	N	L	Q	I	M	T	V	E	N	H	F	M	N	H	I	A	E	L
Template Known Secondary structure								T	B			T	T	T	S		S															S	S																	S	S									T	T	T										T	T	T	B	S			T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	I	L	G	L	D	V	W	E	H	A	Y	Y	L	K	Y	Q	N	K	R	P	D	Y	I	G	A	F	W	N	V	V	N	W	E	K	V	D	E	L	Y	N	A	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	I	L	I	V	D	E	F	E	H	A	Y	Y	L	Q	Y	K	N	K	R	G	D	Y	L	N	A	W	W	N	V	V	N	W	D	D	A	E	K	R	L	Q	K	Y	L
Template Known Secondary structure										S	G	G	G	T					T	T										G	G	G	B											T	T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions