|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
| . |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| Query Sequence |   |
M | F | S | K | V | N | N | Q | K | M | L | E | D | C | F | Y | I | R | K | K | V | F | V | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | G | V | P | E | E | S | E | I | D | E | Y | E | S | E | S | I | H | L | I | G | Y | D | N | G | Q | P | V | A | T | A | R | I | R | P | I | . |
| Query Conservation |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   | . |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| Template Conservation |   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
I | M | L | T | P | M | Q | T | E | E | F | R | S | Y | L | T | Y | T | T | K | H | Y | A | E | E | K | V | K | A | G | T | W | L | P | E | D | A | Q | L | L | S | K | Q | V | F | T | D | L | L | P | R | G | L | E | T | P | H | H | H | L | W | S | L | K | L | N | E | K | D | I | V | G | W | L | W | I | H | A | E | P |
| Template Known Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | G | G | G | S | T | T |  |  |  |  |  |  |  | S | S | S | S |
|  |  |  |  |  |  |  |  |  |
| T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
|   |
|   |   |
|
|
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
. | . |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
| Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
. |
. |
N | E | T | T | V | K | I | E | R | V | A | V | M | K | S | H | R | G | Q | G | M | G | R | M | L | M | Q | A | V | E | S | L | A | K | D | E | G | F | Y | V | A | T | M | N | A | . |
. |
. |
Q | C | H | A | I | P | F | Y | E | S | L | N | F | K | M | R | G | N | I | F | L | E | E | G | I | E | H | I | E | M |
| Query Conservation |   |
. | . |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
| . | . | . |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
| Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|
| Template Sequence |   |
E | H | P | Q | Q | E | A | F | I | Y | D | F | G | L | Y | E | P | Y | R | G | K | G | Y | A | K | Q | A | L | A | A | L | D | Q | A | A | R | S | M | G | I | R | K | L | S | L | H | V | F | A | H | N | Q | T | A | R | K | L | Y | E | Q | T | G | F | Q | E | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | M |
| Template Known Secondary structure |   |
T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| G | G | G |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
150 | . | . |
|   |
|   |   |
137 | . | . | 140 |
| Predicted Secondary structure |   |
 |  |  |
|
| Query SS confidence |   |
|
|
|
|
| Query Sequence |   |
T | K | K | L |
| Query Conservation |   |
  |
|   |
|
| Alig confidence |   |
|
|
|
|
| Template Conservation |   |
  |
|   |
|
| Template Sequence |   |
S | K | K | L |
| Template Known Secondary structure |   |
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |
|
|
| Template SS confidence |   |
|
|
|
|
|   |   |
153 | . | . | . |
|   |