Return to main results Retrieve Phyre Job Id

Job DescriptionP0A0M9
Confidence99.82%DateTue Jul 17 17:05:07 BST 2012
Rank10Aligned Residues135
% Identity18%Templatec3lodA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative acyl-coa n-acyltransferase; PDBTitle: the crystal structure of the putative acyl-coa n-acyltransferase from2 klebsiella pneumoniae subsp.pneumoniae mgh 78578
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  SKVNNQKMLEDCFYIRKKVFVEEQGVPEESEIDEYESESIHLIGYDNGQPVATARIRPINETTVKIERVAVMKSHRGQGM
Query Conservation   
      
     

  

  

        
  
      
       

             
  
 
 
  

 

Alig confidence 







.









..


























































Template Conservation 

     
. 
   
    ..                     
    
  

             
  
 
 
  

 

Template Sequence  ITDIAPTD. AEFIALIAAL. . DAWQETLDLSQLPPQTVIALAIRSPQGEAVGCGAIVLSEEGFGEMKRVYIDPQHRGQQL
Template Known Secondary structure 

TTS...TT

GGGTS
GGG
SS


TTS
TTS
SSS
Template Predicted Secondary structure 




...














Template SS confidence 















































































   4.....10. ........20. ........30.........40.........50.........60.........70.........80
 
   83......90.........100...... ...110.........120.........130... ......140
Predicted Secondary structure 



...











.
Query SS confidence 























. . .


























.






Query Sequence  GRMLMQAVESLAKDEGFYVATMNA. . . QCHAIPFYESLNFKMRGNIFLEEGIEH. IEMTKKL
Query Conservation 
  

          
   
 
 
...   
  

 
 

          

  .  
 
 
Alig confidence 























...


























.






Template Conservation 
  

      
   
   
 
     
  
  

 
 

               
 
 
 
Template Sequence  GEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFAPYQPDPLSVFMEKPL
Template Known Secondary structure  TTT

TT
TT



TT



SS
Template Predicted Secondary structure 
























Template SS confidence 





























































   90.........100.........110.........120.........130.........140.........150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions