Job Description P0A0M9 Confidence 99.70% Date Tue Jul 17 17:05:07 BST 2012 Rank 56 Aligned Residues 127 % Identity 12% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																					.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		S	K	V	N	N	Q	K	M	L	E	D	C	F	Y	I	R	K	K	V	F	V	E	E	Q	G	V	P	E	E	S	E	I	D	E	Y	.	.	.	.	.	.	.	E	S	E	S	I	H	L	I	G	Y	D	N	G	Q	P	V	A	T	A	R	I	R	.	.	.	.	.	P	I	N	E	T	T	V	K	I	E	R
Query Conservation																																					.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L	R	G	F	V	D	D
Template Known Secondary structure							G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	M	K	S	H	R	G	Q	G	M	G	R	M	L	M	Q	A	V	E	S	L	A	K	D	E	G	F	Y	V	A	T	M	N	A	Q	C	H	A	I	P	F	Y	E	S	L	N	F	K	M	R	G	N	I	F	L	E	E	G	I	E	H	I	E	M	T	K	K	L	T	S	L
Query Conservation
Alig confidence																																						.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R	X	.	.	.	.	.	.	.	.	.	L	L	G	Q	A	L	A	P	P
Template Known Secondary structure						G	G	G	T	T	S	S																T	T									.	.	.	.	.						T	T								.	.	.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																																						.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions