Job Description P0A0M9 Confidence 99.61% Date Tue Jul 17 17:05:07 BST 2012 Rank 92 Aligned Residues 140 % Identity 15% Template c2reeB_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	V	N	N	Q	K	M	L	E	D	C	F	Y	I	R	K	K	V	F	V	E	E	Q	G	V	P	E	E	S	E	I	D	E	Y	.	E	S	E	S	I	H	L	I	G	Y	D	N	G	Q	P	V	A	T	A	R	I	R	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	H	P	K	I	E	D	L	R	D	L	I	A	L	E	T	L	C	W	S	E	N	L	Q	V	D	N	E	E	I	Y	R	R	I	F	K	I	P	Q	G	Q	F	I	L	E	L	E	D	K	I	V	G	A	I	Y	S	Q	R	I	D	N	P	Q	L	L	D	N	K	T	C	T	Q	V	P	L	L	H	T	E
Template Known Secondary structure							G	G	G												S		T	T	T															G	G	G							T	T												S		G	G	G	G	T	T			T	T	T	G	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110																											.	.	.	.
Predicted Secondary structure																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	T	T	V	K	I	E	R	V	A	V	M	K	S	H	R	G	Q	G	M	G	R	M	L	M	Q	A	V	E	S	L	A	K	D	E	.	G	F	Y	V	A	T	M	N	A	Q	C	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	F	Y
Query Conservation																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	V	V	V	Q	L	L	A	V	N	I	L	P	E	L	Q	N	Q	G	L	G	D	R	L	L	E	F	M	L	Q	Y	C	A	Q	I	S	G	V	E	K	V	V	A	V	T	L	C	R	N	Y	P	D	Y	S	P	M	P	M	A	E	Y	I	H	Q	K	N	E	S	G	L	L	V	D	P	L	L	R	F	H
Template Known Secondary structure		T		S											T	T	S	T	T	S	S														T	T	S	T	T											S	S	G	G	G	G	T	T	S						T	T		B		T	T	S		B	S	S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		E	S	L	N	F	K	M	R	G	.	.	.	.	.	.	N	I	F	L	E	E	G	I	E	H	I	E	M	T	K	K	L	T	S
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	H	G	A	K	I	E	K	L	L	P	G	Y	R	P	K	D	W	E	N	Q	T	C	G	V	L	V	S	Y	D	I	Q	H
Template Known Secondary structure				T	T								T	T	S		T	T		G	G	G	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions