Return to main results Retrieve Phyre Job Id

Job DescriptionO06446
Confidence99.47%DateTue Jul 17 17:05:02 BST 2012
Rank66Aligned Residues141
% Identity17%Templated2j0sa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.21

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   412.......420.........430.........440.........450.........460.........470.........480.... .....
Predicted Secondary structure 



















..
Query SS confidence 








































































. .




Query Sequence  LIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKG. . AVTIA
Query Conservation   
  
   
  

   
      





 
 

  

 

  
   

   




    





 

  
.. 



Alig confidence 



















..


















































..




Template Conservation          
   
  

   ..   
 


         
   
                  
      
      


 
Template Sequence  VAVEREEWKFDTLCDLYDTL. . TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLIS
Template Known Secondary structure  SSTT..TSS
SSTT



TTS
TSS
Template Predicted Secondary structure 


..



























Template SS confidence 















































































   256...260.........270..... ....280.........290.........300.........310.........320.........330...
 
   490.........500.........510. ........520.........530.........540.........550.........560........
Predicted Secondary structure 










.















Query SS confidence 





















.
























































Query Sequence  TNMAGRGTDIKLGEGVEELGGL. AVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSRLG
Query Conservation 











   
   


.


 

  

 


 

 











 
 




 
   
             
Alig confidence 










.........

.





































.......











Template Conservation 
     



 ......... 
  

  
 
       

 

 

 
  
  
      
.......      
     
Template Sequence  TDVWARGLDVP. . . . . . . . . QVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD. . . . . . . IRILRDIEQYYS
Template Known Secondary structure 
GGGSSS


T.........TSS

SSTTSSGGG

GGG.......TT
Template Predicted Secondary structure 




.........




















.......
Template SS confidence 















































































   334.....340.... .....350.........360.........370.........380..... ....390.......
 
   569570
Predicted Secondary structure 

Query SS confidence 

Query Sequence  LD
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  TQ
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 

   398.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions