Return to main results Retrieve Phyre Job Id

Job DescriptionO06446
Confidence98.78%DateTue Jul 17 17:05:02 BST 2012
Rank126Aligned Residues145
% Identity19%Templated1wp9a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.. .......110.........120..... ....130.........140.........150.........160....
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Query Sequence  PYKVQIMGGIAIHKGD. IAEMRTGEGKTLTATMPTYLNAL. AGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGLNLNS
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Template Sequence  PRIYQEVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGE
Template Known Secondary structure 

GGGS


TTS
S
S

SSB
S
GGG
S
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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  KTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQAN
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Template Sequence  KSPEERSKAWARAKVIVATPQTIENDLLAGRIS. . . . . . LEDVSLIVFDEAHRAV. . . . . . . . . . . . . . . . GNYAYVFIA
Template Known Secondary structure  S

S
TTS

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STGGG
S................TT
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   90.........100.........110.........120.. .......130........ .140.......
 
   245....250...
Predicted Secondary structure 


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Query Sequence  VFAKMLKQD
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Template Conservation           
Template Sequence  REYKRQAKN
Template Known Secondary structure 
SS
Template Predicted Secondary structure 


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   148.150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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