Job Description O06446 Confidence 100.00% Date Tue Jul 17 17:05:02 BST 2012 Rank 14 Aligned Residues 203 % Identity 30% Template d1nkta2 SCOP info Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Resolution 2.60

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		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		S	K	M	V	S	R	A	V	E	S	A	Q	K	R	V	E	G	N	N	F	D	A	R	K	R	I	L	E	Y	D	E	V	L	R	K	Q	R	E	I	I	Y	N	E	R	N	S	I	I	D	E	E	D	S	S	Q	V	V	D	A	M	L	R	S	T	L	Q	R	S	I	N	Y	Y	I	N	T	A	D	.	D	E
Query Conservation																																																																															.
Alig confidence																																																																															.
Template Conservation
Template Sequence		A	K	M	V	T	R	A	I	K	S	A	Q	T	Q	V	E	Q	Q	N	F	E	V	R	K	N	V	L	K	Y	D	E	V	M	N	Q	Q	R	K	V	I	Y	A	E	R	R	R	I	L	E	G	E	N	L	K	D	Q	A	L	D	M	V	R	D	V	I	T	A	Y	V	D	G	A	T	G	E	G	Y	A	E	D
Template Known Secondary structure																																																		T	T																						T	T	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.		.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	E	Y	Q	P	F	I	D	Y	I	N	D	I	F	L	Q	E	G	D	I	T	E	D	D	I	K	G	K	D	A	E	D	I	F	E	V	V	W	A	K	I	E	A	A	Y	Q	S	Q	K	D	.	I	L	E	E	Q	M	N	E	F	E	R	M	I	L	L	R	S	I	D	S	H	W	T	D	H	I	D	T	M
Query Conservation																																																				.
Alig confidence																									.	.	.	.																								.
Template Conservation																									.	.	.	.
Template Sequence		W	D	L	D	A	L	W	T	A	L	K	T	L	Y	P	V	G	I	T	A	D	S	L	.	.	.	.	T	L	L	E	A	L	L	K	D	A	E	R	A	Y	A	A	R	E	A	E	L	E	E	I	A	G	E	G	A	M	R	Q	L	E	R	N	V	L	L	N	V	I	D	R	K	W	R	E	H	L	Y	E	M
Template Known Secondary structure		S													S				S		T	T	T	T	.	.	.	.																											T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.					.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	R	Q	G	I	H	L	R	S	Y	A	Q	Q	N	P	L	R	D	Y	Q	N	E	G	H	E	L	F	D	I	M	M	Q	N	I	E	E	D	T	C	K	F	I	L	K	S	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	L	K	E	G	I	G	L	R	A	M	A	Q	R	D	P	L	V	E	Y	Q	R	E	G	Y	D	M	F	M	A	M	L	D	G	M	K	E	E	S	V	G	F	L	F	N	V	T	V
Template Known Secondary structure									G	G	G		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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