Return to main results Retrieve Phyre Job Id

Job DescriptionO06446
Confidence98.98%DateTue Jul 17 17:05:02 BST 2012
Rank121Aligned Residues104
% Identity21%Templated1jr6a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   430.........440.........450.........460.........470.........480.........490.........500.........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  EKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEELG
Query Conservation       





 
 

  

 

  
   

   




    





 

  
 















   
   
Alig confidence 











































.....





















.........
Template Conservation         
 


       
 
   
                  .....
      




     


  .........
Template Sequence  LEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSV. . . . . IPTNGDVVVVATDALMTGFTGD. . . . . . . . .
Template Known Secondary structure  TTS

S
T

TT

S

.....
TTSS
SSSS
SSS


.........
Template Predicted Secondary structure 
















.....








.........
Template SS confidence 















































































   30.........40.........50.........60.........70... ......80.........90.....
 
   510........ .520.........530.........540........
Predicted Secondary structure 


....









Query SS confidence 








. . . .





























Query Sequence  GLAVIGTER. . . . HESRRIDDQLRGRSGRQGDKGDSRFYLSLQ
Query Conservation 




 

 .... 

 


 

 











 
 



Alig confidence 








....















.












Template Conservation     

        
       

 




.   
        
Template Sequence  FDSVIDCNTSDGKPQDAVSRTQRRGRTGR. GKPGIYRFVAPGE
Template Known Secondary structure  BS
STT

TTB
S.SS


SS
Template Predicted Secondary structure 












.





Template SS confidence 










































   96...100.........110.........120.... .....130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions