Job Description O06446 Confidence 62.62% Date Tue Jul 17 17:05:02 BST 2012 Rank 249 Aligned Residues 79 % Identity 19% Template c3vkwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:replicase large subunit; PDBTitle: crystal structure of the superfamily 1 helicase from tomato mosaic2 virus Resolution 1.90 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	L	A	G	R	G	V	H	V	I	T	V	N	E	Y	L	S	S	V	Q	S	E	E	M	A	E	L	Y	N	F	L	G	L	T	V	G	L	N	L	N	S	K	T	T	E	E	K	R	E	A	Y	A	Q	D	I	T	Y	S	T
Query Conservation
Alig confidence														.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	D	G	V	P	G	C	G	K	T	K	.	.	.	.	.	E	I	L	S	R	V	N	F	E	E	D	L	I	L	V	P	G	R	Q	A	A	E	M	I	R	R	R	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	I	I	V	A	T	K	D	N	V	R	T
Template Known Secondary structure							T	T	S					.	.	.	.	.								T	T	T						S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						T	T	T
Template Predicted Secondary structure														.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		830	.	.	.	.	.	.	.	.	.	840	.						.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870																					.	.	.	.	.	.	.	.	.	880	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	E	L	G	F	D	Y	L	R	D	N	M	V	N	Y	S	E	D	R	V	M	R	P	L	H	F	A	I	I	D	E	V
Query Conservation
Alig confidence						.	.	.	.									.	.	.	.	.
Template Conservation						.	.	.	.									.	.	.	.	.
Template Sequence		V	D	S	F	.	.	.	.	L	M	N	Y	G	K	G	A	.	.	.	.	.	R	C	Q	F	K	R	L	F	I	D	E	G
Template Known Secondary structure						.	.	.	.			T	T	T	S	S		.	.	.	.	.					S						T	G
Template Predicted Secondary structure						.	.	.	.									.	.	.	.	.
Template SS confidence
		885	.	.	.					.	890	.	.	.	.	.	.						.	.	.	900	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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