Job Description O06446 Confidence 44.26% Date Tue Jul 17 17:05:02 BST 2012 Rank 294 Aligned Residues 111 % Identity 15% Template c3vaaC_ PDB info PDB header:transferase Chain: C: PDB Molecule:shikimate kinase; PDBTitle: 1.7 angstrom resolution crystal structure of shikimate kinase from2 bacteroides thetaiotaomicron Resolution 1.70 Å

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		373	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure												.																			.
Query SS confidence												.																			.
Query Sequence		L	A	G	M	T	G	T	A	K	T	.	E	E	E	E	F	R	N	I	Y	N	M	T	V	T	Q	I	P	T	.	N	K	P	V	Q	R	N	D	K	S	D	L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E	K	H	K	A	G	Q	P	V	L	L	G	T	V	A	V	E	T	S	E	Y
Query Conservation												.																			.
Alig confidence												.																			.
Template Conservation
Template Sequence		L	T	G	Y	M	G	A	G	K	T	T	L	G	K	A	F	A	R	K	L	N	V	P	F	I	D	L	D	W	Y	I	E	E	R	F	H	K	T	V	G	E	L	F	T	E	R	G	E	A	G	F	R	E	L	E	R	N	M	L	H	E	V	A	E	F	E	N	V	V	I	S	T	G	G	G	A	P	C	F	Y
Template Known Secondary structure						T	T	S														T															T	S																										T	T		S	S							T	T	G	G	G	S	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	N	L	L	K	K	R	G	I	R	H	D	V	L	N	A	K	N	H	E	R	E	A	E	I	V	A	G	A	G	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	M	E	F	M	N	R	T	G	K	T	V	F	L	N	V	H	P	D	V	L	F	R	R	L	R	I	L	Q	G	K	E
Template Known Secondary structure		T									S																				T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions