Job Description O06446 Confidence 33.18% Date Tue Jul 17 17:05:02 BST 2012 Rank 347 Aligned Residues 103 % Identity 13% Template c3u4qA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:atp-dependent helicase/nuclease subunit a; PDBTitle: structure of addab-dna complex at 2.8 angstroms Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		Y	K	V	Q	I	M	G	G	I	A	I	H	K	G	D	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	L	A	G	R	.	.	.	.	.	.	G	V	H	V	I	T	V	N	E	Y	L	S	S	V	Q	S	E	E	M	A	E	L	Y	N	F	L	G	L	T	V	G	L	N
Query Conservation																																											.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		T	D	D	Q	W	N	A	I	V	S	T	G	Q	D	I	L	V	A	A	A	A	G	S	G	K	T	A	V	L	V	E	R	M	I	R	K	I	T	A	E	E	N	P	I	D	V	D	R	L	L	V	V	T	F	T	N	A	S	A	A	E	M	K	H	R	I	A	E	A	L	E	K	E	L	V	Q	.	.	.	.
Template Known Secondary structure													S	S								T	T																S		S	S	S				G	G	G						S	S																						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	K	T	T	E	E	K	R	E	A	Y	A	Q	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	G	S	L	H	I	R	R	Q	L	S	L	L	N	R	A	S	I	S	T	L	H	S	F	C	L	Q	V	L	K	K	Y
Template Known Secondary structure		S	T	T											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions