Job Description O06446 Confidence 98.50% Date Tue Jul 17 17:05:02 BST 2012 Rank 133 Aligned Residues 124 % Identity 19% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.
Predicted Secondary structure																																																				.	.	.	.	.																						.
Query SS confidence																																																				.	.	.	.	.																						.
Query Sequence		K	R	V	F	N	M	T	P	Y	K	V	Q	I	M	G	G	I	A	I	H	K	G	D	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	L	A	G	R	G	.	.	.	.	.	V	H	V	I	T	V	N	E	Y	L	S	S	V	Q	S	E	E	M	A	E	L	.	Y	N	F
Query Conservation																																																				.	.	.	.	.																						.
Alig confidence																																																				.	.	.	.	.																						.
Template Conservation
Template Sequence		R	E	L	L	P	V	K	K	F	E	S	E	I	L	E	A	I	S	Q	N	S	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A	E	C	N	I	V	V	T	Q	P	R	R	I	S	A	V	S	V	A	E	R	V	A	F	E	R	G	E	E
Template Known Secondary structure				T	S	G	G	G	G	G												S								T	T	S	S																T	T		G	G	G								S	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	T	V	G	L	N	L	N	S	K	T	T	E	E	K	R	E	A	Y	A	Q	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	N	Y	S	E	D	R	V	M	R	P	L	H	F	A	I	I	D	E	V	D
Query Conservation
Alig confidence																						.	.	.											.								.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.											.								.	.	.	.	.	.	.	.	.
Template Sequence		P	G	K	S	C	G	Y	S	V	R	F	E	S	I	L	P	R	P	H	A	.	.	.	S	I	X	F	C	T	V	G	V	L	.	L	R	K	L	E	A	G	.	.	.	.	.	.	.	.	.	I	R	G	I	S	H	V	I	V	D	E	I	H
Template Known Secondary structure		T	T	S	S						T	T							S	S	S	.	.	.											.								.	.	.	.	.	.	.	.	.		T	T									T	T
Template Predicted Secondary structure																						.	.	.											.								.	.	.	.	.	.	.	.	.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.				.	.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.										.	.	.	.	.	.	.	.	510	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions