Return to main results Retrieve Phyre Job Id

Job DescriptionO06446
Confidence74.31%DateTue Jul 17 17:05:02 BST 2012
Rank221Aligned Residues120
% Identity13%Templatec3ijpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase from2 bartonella henselae at 2.0a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   373......380.. .......390.........400.........410.........420.........430.........440.........450.
Predicted Secondary structure 




.





















Query SS confidence 









.




































































Query Sequence  LAGMTGTAKT. EEEEFRNIYNMTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYI
Query Conservation 
 





 
.
  
   

 
 

 


 

  
 
  
 
  
   
  

   
      





 
 

  

 
Alig confidence 









.





















































.













Template Conservation 
 

 



  
   
    
 


  
          
           
 
  

       
.





 
      
Template Sequence  VVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTE. GILDFSQPQASVLY
Template Known Secondary structure  SSTTST
SSB

TT
TTTTSBGGGGTT
S

S
B
BS
TTS
S.
S
Template Predicted Secondary structure 






































.

Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60......... 70.........80...
 
   452.......460.........470.........480.........490...
Predicted Secondary structure 

















Query SS confidence 









































Query Sequence  SNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMA
Query Conservation 
  
   

   




    





 

  
 







Alig confidence 









































Template Conservation         
  






        
   
   


 
 


Template Sequence  ANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTTIVKSGNMS
Template Known Secondary structure  T






TTS
S


Template Predicted Secondary structure 














Template SS confidence 









































   84.....90.........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions