Job Description O06446 Confidence 23.38% Date Tue Jul 17 17:05:02 BST 2012 Rank 412 Aligned Residues 169 % Identity 17% Template c3hfrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes Resolution 2.30 Å

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		379	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	A	K	T	E	E	.	E	E	F	R	N	I	Y	N	M	T	V	T	Q	I	P	T	N	K	P	V	Q	R	N	D	K	S	D	L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E	K	H	K	A	G	Q	P	V	L	L	G	T	V	A	V	E	T	S	E	Y	I	S	N	L	L	K	K
Query Conservation								.
Alig confidence								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	T	A	A	A	L	Y	D	I	R	E	K	L	D	I	P	V	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	P	G	S	R	A	A	L	K	A	T	R	N	N	K	I	G	V	L	G	T	L	G	T	V	E	S	X	A	Y	P	T	A	L	K	G
Template Known Secondary structure																S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S	S														T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.						.	.	.	490	.	.	.	.	.	.	.	.		.	500	.	.									.	.	.	.	.	.	.	510			.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																															.	.	.	.	.													.					.	.	.	.	.	.	.	.									.	.
Query SS confidence																															.	.	.	.	.													.					.	.	.	.	.	.	.	.									.	.
Query Sequence		R	G	I	R	H	D	V	L	N	A	K	N	H	E	R	E	A	E	I	V	A	G	A	G	Q	K	G	A	V	.	.	.	.	.	T	I	A	T	N	M	A	G	R	G	T	D	.	I	K	L	G	.	.	.	.	.	.	.	.	E	G	V	E	E	L	G	G	.	.	L	A	V	I	G	T	E	R	H	E	S
Query Conservation																															.	.	.	.	.													.					.	.	.	.	.	.	.	.									.	.
Alig confidence																															.	.	.	.	.													.					.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		L	N	R	R	V	E	V	D	S	L	A	C	P	K	F	V	S	V	V	E	S	G	E	Y	K	S	A	I	A	K	K	V	V	A	E	S	L	L	P	L	K	S	T	K	I	D	T	V	I	L	G	C	T	H	Y	P	L	L	K	P	I	I	E	N	F	X	G	D	G	V	A	V	I	N	S	G	E	E	T	A
Template Known Secondary structure				T	T									T	T							T	T		T	T	S												G	G	G	G	G	S									S	T	T	G	G	G	G										T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		522	.	.	.	.	.	.	.	530	.	.			.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		R	R	I	D	D	Q	L	R	G	R	S	.	.	G	R	Q	G	D	K	G	D	S	R	F	Y	L	S	L	Q	D	E	L	M	I	R	F	G	S	E	R	L	Q	K	M	M	S	R	L	G	L	D	D	S	T	P	I	E	S
Query Conservation													.	.
Alig confidence													.	.																	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		S	E	V	S	A	L	L	D	Y	H	N	L	L	D	A	T	D	E	E	I	E	H	R	F	F	T	T	G	S	.	.	.	.	.	.	.	.	T	Q	I	F	K	D	I	A	K	D	W	L	N	X	P	D	X	T	V	E	H
Template Known Secondary structure											T	T		S														S	S		.	.	.	.	.	.	.	.												S	S		T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions