Job Description O06446 Confidence 35.91% Date Tue Jul 17 17:05:02 BST 2012 Rank 339 Aligned Residues 57 % Identity 16% Template c3h0gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase ii subunit rpb1; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830		.	.	.	.	.	.	.	.	.	840	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		V	E	D	N	I	E	R	E	K	T	T	E	F	G	E	A	K	H	V	S	A	E	D	G	K	E	K	V	K	P	K	P	I	V	K	G	D	Q	V	G	R	N	D	D	C	P	.	C	G	S	G	K	K	F	K	N	C	H	G	K
Query Conservation																																																.
Alig confidence																																																.			.	.
Template Conservation																																																			.	.
Template Sequence		S	P	E	E	I	R	S	M	S	V	A	K	I	E	F	P	E	T	M	D	E	S	G	Q	R	P	R	V	G	G	L	L	D	P	R	L	G	T	I	D	R	Q	F	K	C	Q	T	C	G	.	.	E	T	M	A	D	C	P	G	H
Template Known Secondary structure																	T	T		T	T		S	S	S	S	S			S	S	S	S	S	S	S				S	S	S	S				T	T	S		.	.		S	S	S	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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