Return to main results Retrieve Phyre Job Id

Job DescriptionO06446
Confidence65.01%DateTue Jul 17 17:05:02 BST 2012
Rank241Aligned Residues31
% Identity26%Templatec3ez6B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:plasmid partition protein a; PDBTitle: structure of para-adp complex:tetragonal form
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120..... ....130...
Predicted Secondary structure 





......



Query SS confidence 






















. . . . . .







Query Sequence  IAEMRTGEGKTLTATMPTYLNAL. . . . . . AGRGVHVI
Query Conservation 



 







  


 
 

...... 
  



Alig confidence 






















......







Template Conservation 
 
 







 
  

  

        
 




Template Sequence  ISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVI
Template Known Secondary structure 

SSSSSS
TTTGGG


Template Predicted Secondary structure 









Template SS confidence 




































   113......120.........130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions