Job Description O06446 Confidence 60.93% Date Tue Jul 17 17:05:02 BST 2012 Rank 255 Aligned Residues 69 % Identity 23% Template c3eplA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Resolution 3.60 Å

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		373	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400												.	.	.	.	.											.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure												.																			.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																			.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	M	T	G	T	A	K	T	.	E	E	E	E	F	R	N	I	Y	N	M	T	V	T	Q	I	P	T	.	.	.	.	.	.	.	.	.	.	.	N	K	P	V	Q	.	.	.	.	.	.	.	.	.	.	R	N	D	K	S	D	L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E
Query Conservation												.																			.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Alig confidence												.																			.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	T	T	G	V	G	K	S	Q	L	S	I	Q	L	A	Q	K	F	N	G	E	V	I	N	S	D	S	M	Q	V	Y	K	D	I	P	I	I	T	N	K	H	P	L	Q	E	R	E	G	I	P	H	H	V	M	N	H	V	D	W	S	E	E	Y	Y	S	H	R	F	E	T	E	C	M	N	A	I	E	D
Template Known Secondary structure						S	S	S													T	T		B						T	T	T	S	S	S	S										G	G	G	G	T	T					S		S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		431	.	.	.	.	.		.	.	.	440	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	H	K	A	G	Q	.	P	V	L	L	G
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		I	H	R	R	G	K	I	P	I	V	V	G
Template Known Secondary structure				T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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