Job Description O06446 Confidence 99.46% Date Tue Jul 17 17:05:02 BST 2012 Rank 68 Aligned Residues 158 % Identity 18% Template c3dkpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp Resolution 2.10 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																							.	.	.	.
Query SS confidence																														.	.																							.	.	.	.
Query Sequence		V	R	E	G	S	K	R	V	F	N	M	T	P	Y	K	V	Q	I	M	G	G	I	A	I	H	K	G	D	.	.	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	.	.	.	.	L	A	G	R	G	V	H	V	I	T	V	N	E	Y	L	S	S	V	Q	S	E	E	M	A
Query Conservation																														.	.																							.	.	.	.
Alig confidence																														.	.																							.	.	.	.
Template Conservation
Template Sequence		L	L	Q	N	I	L	D	A	G	F	Q	M	P	T	P	I	Q	M	Q	A	I	P	V	M	L	H	G	R	E	L	L	A	S	A	P	T	G	S	G	K	T	L	A	F	S	I	P	I	L	M	Q	L	K	Q	P	A	N	K	G	F	R	A	L	I	I	S	P	T	R	E	L	A	S	Q	I	H	R	E	L	I
Template Known Secondary structure									T	T			S														T	T									T	T	S																S			S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		E	L	Y	N	F	L	G	L	T	V	G	L	N	L	N	S	K	T	T	E	E	K	.	.	.	R	E	A	Y	A	Q	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	N	Y	S	E	D	R	V	M	R	P	L	H	F	A	I	I	D	E	V	D	S	I	L	I	D	E	A	R	T
Query Conservation																								.	.	.
Alig confidence																								.	.	.																.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		K	I	S	E	G	T	G	F	R	I	H	M	I	H	K	A	A	V	A	A	K	K	F	G	P	K	S	S	K	K	F	D	I	L	V	T	T	P	N	R	.	.	.	.	.	L	I	Y	L	L	K	Q	D	P	P	G	I	D	L	A	S	V	E	W	L	V	V	D	E	S	D	K	L	F	.	.	.	.	.	.
Template Known Secondary structure				T	T	T	S															T	T	T	S	T	T	S														.	.	.	.	.							S	S	S		S				T	T							S	S						.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		P	L	I	I	S	G	E	A	E	K	S	.	T	S	L	Y	T	Q	A	N	V	F	A	K	M	L	K	Q	D
Query Conservation													.
Alig confidence		.	.	.	.	.	.	.	.	.	.		.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	D	G	G	F	R	D	Q	L	A	S	I	F	L	A	C	T	S	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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