Job Description O06446 Confidence 63.28% Date Tue Jul 17 17:05:02 BST 2012 Rank 247 Aligned Residues 69 % Identity 23% Template c3d3qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 Resolution 2.70 Å

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		373	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.												.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.											.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure												.																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	M	T	G	T	A	K	T	.	E	E	E	E	F	R	N	I	Y	N	M	T	V	T	Q	I	.	.	.	.	.	.	.	.	.	.	.	P	T	N	K	P	V	Q	R	N	D	K	S	D	L	I	Y	I	.	.	.	.	.	.	.	.	.	.	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E
Query Conservation												.																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	G	P	T	A	S	G	K	T	E	L	S	I	E	V	A	K	K	F	N	G	E	I	I	S	G	D	S	X	Q	V	Y	Q	G	X	D	I	G	T	A	K	V	T	T	E	E	X	E	G	I	P	H	Y	X	I	D	I	L	P	P	D	A	S	F	S	A	Y	E	F	K	K	R	A	E	K	Y	I	K	D
Template Known Secondary structure					S	T	T	S	S												T	T								S	S	T	T	B	T	T			T	T	T	T				T	T	T	T	T	T					S	S	S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		431	.	.	.	.	.		.	.	.	440	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	H	K	A	G	Q	.	P	V	L	L	G
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		I	T	R	R	G	K	V	P	I	I	A	G
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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