Job Description O06446 Confidence 73.22% Date Tue Jul 17 17:05:02 BST 2012 Rank 224 Aligned Residues 121 % Identity 10% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	D	G	N	N	K	E	I	K	Q	L	G	K	L	A	D	K	V	I	A	L	E	E	K	T	A	I	L	T	D	E	E	I	R	N	K	T	K	Q	F	Q	T	E	L	A	D	I	D	N	V	K	K	Q	N	D	Y	L	D	K	I	L	P	E	A	Y	A	L	V	R	E	G	S	K	R	V	F	N	M	T	.
Query Conservation																																																																																	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	Q	H	C	Q	T	V	S	E	Y	F	Q	K	R	K	A	I	S	I	A	Q	Q	I	I	E	N	V	N	V	K	P	I	Q	E	A	V	S	E	L	M	E	I	E	I	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	L	V	T	V	Y	E	E	I	E	S	A	D	G	N	I	T	G	V	P	S
Template Known Secondary structure																					T												T														.	.	.	.	.	.	.	.	.	.	.	.		G	G	G									T			S	S			S	B
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.													.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
				87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.																	.	.																																	.	.	.
Query SS confidence		.	.																	.	.																																	.	.	.
Query Sequence		.	.	P	Y	K	V	Q	I	M	G	G	I	A	I	H	K	G	D	.	.	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	L	A	G	R	G	V	H	V	I	T	.	.	.	V	N	E	Y	L	S	S	V
Query Conservation		.	.																	.	.																																	.	.	.
Alig confidence		.	.										.	.						.	.																																	.	.	.
Template Conservation													.	.
Template Sequence		G	F	T	E	L	D	R	M	T	Y	G	.	.	Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R
Template Known Secondary structure		S									S	S	.	.	B		S	S									S	S	S	S															T	T								S	S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions