Job Description O06446 Confidence 99.15% Date Tue Jul 17 17:05:02 BST 2012 Rank 108 Aligned Residues 124 % Identity 22% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E	K	H	K	A	G	Q	P	V	L	L	G	T	V	A	V	E	T	S	E	Y	I	S	N	L	L	K	K	R	G	I	R	H	D	V	L	N	A	K	N	H	E	R	E	A	E	I	V	A	G	A	G	Q	K	G	.	.	A	V	T	I	A
Query Conservation																																																																											.	.
Alig confidence																					.	.	.																																																				.	.
Template Conservation																					.	.	.
Template Sequence		V	E	Y	V	K	E	E	A	K	M	V	Y	L	L	E	C	L	Q	K	.	.	.	T	P	P	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V	L	V	A
Template Known Secondary structure							G	G	G										T	T	.	.	.	S		S							S																T								T	T	S															T	S		S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	N	M	A	G	R	G	T	D	I	K	L	G	E	G	V	E	E	L	G	G	L	.	A	V	I	G	T	E	R	H	E	S	R	R	I	D	D	Q	L	R	G	R	S	G	R	Q	G	D	K	G	D	S	R	F	Y	L	S	L	Q	D	E
Query Conservation																								.
Alig confidence													.	.	.	.	.	.	.	.	.			.																								.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		T	D	V	A	S	K	G	L	D	F	P	.	.	.	.	.	.	.	.	.	A	I	Q	H	V	I	N	Y	D	M	P	E	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	.	.	.	T	G	I	A	T	T	F	I	N	K	A	C	D
Template Known Secondary structure							T	T					.	.	.	.	.	.	.	.	.			S					S	S			S	S									T	T	S			.	.	.										T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.										500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions