Job Description O06446 Confidence 99.23% Date Tue Jul 17 17:05:02 BST 2012 Rank 100 Aligned Residues 158 % Identity 17% Template c2oxcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp Resolution 1.30 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																											.	.	.
Query SS confidence																																.	.																											.	.	.
Query Sequence		A	L	V	R	E	G	S	K	R	V	F	N	M	T	P	Y	K	V	Q	I	M	G	G	I	A	I	H	K	G	D	.	.	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	L	A	G	R	.	.	.	G	V	H	V	I	T	V	N	E	Y	L	S	S	V	Q	S	E	E	M
Query Conservation																																.	.																											.	.	.
Alig confidence																																.	.																											.	.	.
Template Conservation
Template Sequence		R	P	V	L	E	G	L	R	A	A	G	F	E	R	P	S	P	V	Q	L	K	A	I	P	L	G	R	C	G	L	D	L	I	V	Q	A	K	S	G	T	G	K	T	C	V	F	S	T	I	A	L	D	S	L	V	L	E	N	L	S	T	Q	I	L	I	L	A	P	T	R	E	I	A	V	Q	I	H	S	V	I
Template Known Secondary structure											T	T			S														T	T									T	T	S	S															T	T	S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		A	E	L	Y	N	F	L	G	L	T	V	G	L	N	L	N	S	K	T	.	.	T	E	E	K	R	E	A	Y	A	Q	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	N	Y	S	E	D	R	V	M	R	P	L	H	F	A	I	I	D	E	V	D	S	I	L	I	D	E	A	R	T
Query Conservation																					.	.
Alig confidence																					.	.																					.											.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																											.											.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		T	A	I	G	I	K	M	E	G	L	E	C	H	V	F	I	G	G	T	P	L	S	Q	D	K	T	R	L	K	K	C	H	I	A	V	G	S	P	G	R	I	.	K	Q	L	I	E	L	D	Y	L	N	.	.	.	.	.	.	P	G	S	I	R	L	F	I	L	D	E	A	D	K	L	L	.	.	.	.	.	.
Template Known Secondary structure					T	T	T	S	T	T								T	T	S									T	T	S		S										.						T	T	S	S		.	.	.	.	.	.	G	G	G							S	S						.	.	.	.	.	.
Template Predicted Secondary structure																																											.											.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	L	I	I	S	G	E	A	E	K	S	T	S	.	L	Y	T	Q	A	N	V	F	A	K	M	L	K	Q	D
Query Conservation															.
Alig confidence		.	.	.	.	.	.	.	.	.	.				.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	E	G	S	F	Q	E	Q	I	N	W	I	Y	S	S	L	P	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	T	T	S	S											S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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