Job Description O06446 Confidence 99.39% Date Tue Jul 17 17:05:02 BST 2012 Rank 79 Aligned Residues 141 % Identity 22% Template c2hjvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase dbpa; PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein Resolution 1.95 Å

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		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E	K	H	K	A	G	Q	P	V	L	L	G	T	V	A	V	E	T	S	E	Y	I	S	N	L	L	K	K	R	G	I	R	H	D	V	L	N	A	K	N	H	E	R	E	A	E	I	V	A	G	A	G	Q	K	G	.	.	A	V	T	I	A
Query Conservation																																																																											.	.
Alig confidence																					.	.																																																					.	.
Template Conservation																					.	.
Template Sequence		V	I	Q	V	R	E	E	N	K	F	S	L	L	K	D	V	L	M	T	.	.	E	N	P	D	S	C	I	I	F	C	R	T	K	E	H	V	N	Q	L	T	D	E	L	D	D	L	G	Y	P	C	D	K	I	H	G	G	M	I	Q	E	D	R	F	D	V	M	N	E	F	K	R	G	E	Y	R	Y	L	V	A
Template Known Secondary structure							G	G	G												.	.				S	S						S	S														T	T								T	T	S															T	S		S
Template Predicted Secondary structure																					.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	N	M	A	G	R	G	T	D	I	K	L	G	E	G	V	E	E	L	G	G	L	.	A	V	I	G	T	E	R	H	E	S	R	R	I	D	D	Q	L	R	G	R	S	G	R	Q	G	D	K	G	D	S	R	F	Y	L	S	L	Q	D	E	L	M	I	R	F	G	S	E	R	L	Q	K	M	M	S	R	L	G
Query Conservation																								.
Alig confidence													.	.	.	.	.	.	.	.	.			.																																							.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template Sequence		T	D	V	A	A	R	G	I	D	I	E	.	.	.	.	.	.	.	.	.	N	I	S	L	V	I	N	Y	D	L	P	L	E	K	E	S	Y	V	H	R	T	G	R	T	G	R	A	G	N	K	G	K	A	I	S	F	V	T	A	F	E	.	.	.	.	.	.	.	K	R	F	L	A	D	I	E	E	Y	I	G
Template Known Secondary structure			T	T	T	T	T	T	S				.	.	.	.	.	.	.	.	.		B	S					S	S			S	S									T	T	B		B	T	T	B										T	T		.	.	.	.	.	.	.												T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.	.	.	.	360
		569	570
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		361	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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