Job Description O06446 Confidence 22.92% Date Tue Jul 17 17:05:02 BST 2012 Rank 423 Aligned Residues 168 % Identity 15% Template c2gzmB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of the glutamate racemase from bacillus2 anthracis Resolution 1.99 Å

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		379	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	A	K	T	E	E	.	E	E	F	R	N	I	Y	N	M	T	V	T	Q	I	P	T	N	K	P	V	Q	R	N	D	K	S	D	L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E	K	H	K	A	G	Q	P	V	L	L	G	T	V	A	V	E	T	S	E	Y	I	S	N	L	L	K	K
Query Conservation								.
Alig confidence								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	T	A	V	V	L	E	E	M	Q	K	Q	L	P	I	P	V	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	P	G	S	R	T	A	L	K	V	T	N	T	Y	H	V	G	I	I	G	T	I	G	T	V	K	S	G	A	Y	E	E	A	L	K	S
Template Known Secondary structure																S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S															T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.							.	.	490	.	.	.	.	.	.	.	.		.	500	.	.									.	.	.	.	.	.			.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																																.	.	.	.	.	.												.					.	.	.	.	.	.	.	.							.	.
Query SS confidence																																.	.	.	.	.	.												.					.	.	.	.	.	.	.	.							.	.
Query Sequence		R	G	I	R	H	D	V	L	N	A	K	N	H	E	R	E	A	E	I	V	A	G	A	G	Q	K	G	A	V	T	.	.	.	.	.	.	I	A	T	N	M	A	G	R	G	T	D	.	I	K	L	G	.	.	.	.	.	.	.	.	E	G	V	E	E	L	.	.	G	G	L	A	V	I	G	T	E	R	H	E
Query Conservation																																.	.	.	.	.	.												.					.	.	.	.	.	.	.	.							.	.
Alig confidence										.																						.	.	.	.	.	.												.					.	.	.	.	.	.	.	.							.	.
Template Conservation										.
Template Sequence		I	N	N	R	V	M	V	E	.	S	L	A	C	P	P	F	V	E	L	V	E	S	G	N	F	E	S	E	M	A	Y	E	V	V	R	E	T	L	Q	P	L	K	N	T	D	I	D	T	L	I	L	G	C	T	H	Y	P	I	L	G	P	V	I	K	Q	V	M	G	D	K	V	Q	L	I	S	S	G	D	E	T
Template Known Secondary structure				T	T					.					T	T							T	T		S	S	S																S	S			S						S	T	T	G	G	G	G										T	T	S
Template Predicted Secondary structure										.
Template SS confidence
		134	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		521	.	.	.	.	.	.	.	.	530	.			.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		S	R	R	I	D	D	Q	L	R	G	R	.	.	S	G	R	Q	G	D	K	G	D	S	R	F	Y	L	S	L	Q	D	E	L	M	I	R	F	G	S	E	R	L	Q	K	M	M	S	R	L	G	L	D	D	S	T	P	I	E	S
Query Conservation													.	.
Alig confidence													.	.																		.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		A	R	E	V	S	T	I	L	Y	H	S	K	M	L	N	E	G	E	E	Q	S	D	H	L	F	L	T	T	G	K	.	.	.	.	.	.	.	.	I	G	L	F	K	E	I	A	S	K	W	F	G	Q	P	I	E	N	V	K	H
Template Known Secondary structure												T	T					S											S	S		.	.	.	.	.	.	.	.								T	T	T	T	T				S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions