Job Description O06446 Confidence 99.26% Date Tue Jul 17 17:05:02 BST 2012 Rank 97 Aligned Residues 385 % Identity 16% Template c1z63A_ PDB info PDB header:hydrolase/dna complex Chain: A: PDB Molecule:helicase of the snf2/rad54 hamily; PDBTitle: sulfolobus solfataricus swi2/snf2 atpase core in complex2 with dsdna Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																														.	.
Query SS confidence																				.	.	.	.	.	.																														.	.
Query Sequence		F	N	M	T	P	Y	K	V	Q	I	M	G	G	I	A	I	H	K	.	.	.	.	.	.	G	D	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	M	P	T	Y	L	N	A	L	A	G	R	G	.	.	V	H	V	I	T	V	N	E	Y	L	S	S	V	Q	S	E	E	M	A	E	L	Y	N	F	L
Query Conservation																				.	.	.	.	.	.																														.	.
Alig confidence																				.	.	.	.	.	.																														.	.									.					.	.	.
Template Conservation																																																																	.					.	.	.
Template Sequence		I	K	A	N	L	R	P	Y	Q	I	K	G	F	S	W	X	R	F	X	N	K	L	G	F	G	I	C	L	A	D	D	X	G	L	G	K	T	L	Q	T	I	A	V	F	S	D	A	K	K	E	N	E	L	T	P	S	L	V	I	C	P	L	S	.	V	L	K	N	.	.	.	W	E	E	E	L	S	K	F	A
Template Known Secondary structure			S	S																			T	T									T	T	S																T	T			S	S							S	T	.	T				.	.	.
Template Predicted Secondary structure																																																																	.					.	.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.				.	.	.	510	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.												.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	T	V	G	L	N	L	N	S	K	T	T	E	E	K	R	E	A	Y	A	Q	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	N	Y	S	E	D	R	V	M	R	P	L	H	F	A	I	I	D	E	V	D	S	I	L	I	D	E	.	.	.	.	.	.	.	.	.	.	.	A
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.											.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	L	R	F	A	V	F	H	E	D	R	S	K	I	K	L	E	D	Y	.	.	D	I	I	L	T	T	Y	A	V	L	.	.	.	.	.	.	.	.	.	.	L	R	D	T	R	L	K	E	V	E	W	K	Y	I	V	I	D	E	A	Q	N	I	K	N	P	Q	T	K	I	F	K	A	V	K	E	L	K	S
Template Known Secondary structure		T	T	S						S	S	S	T	T	S			G	G	G	S	.	.	S										.	.	.	.	.	.	.	.	.	.	T	T						T										T	G	G	G	G	S		T	T	S								T	S
Template Predicted Secondary structure																						.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.			.	.	.	.	540	.	.	.	.	.											.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		R	T	P	L	I	I	S	G	E	A	E	K	S	T	.	.	S	L	Y	T	Q	A	N	V	F	A	K	M	L	K	Q	D	E	D	Y	K	Y	D	E	K	T	K	A	V	H	L	T	E	Q	G	A	D	K	A	E	R	M	F	K	V	E	N	L	Y	D	V	Q	N	V	D	V	I	S	H	I	N	T	A	L	R
Query Conservation																.	.
Alig confidence																.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	R	I	A	L	T	G	T	P	I	E	N	K	V	D	D	L	W	S	I	X	T	F	L	N	P	G	L	L	G	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	F	K	S	K	F	A	T	P	I	K	K	G	D	N	X	A	K	E	E	L	K	A	I	I
Template Known Secondary structure									S	S		S	T	T													S	T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T						T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.																						.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	V	T	L	Q	R	D	V	D	Y	M	V	V	D	G	E	V	L	I	V	D	Q	F	T	G	R	T	M	P	G	R	R	F	S	E	G	L	H	Q	A	I	E	A	K	E	G	V	Q	I	Q	N	E	S	K	T	M	A	S	I	T	F	Q	N	Y	F	R	M	Y	N	K	L	A	G	M	T	G	T	A	K
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		S	P	F	I	L	R	R	T	K	Y	D	K	A	I	I	N	D	L	P	D	K	I	E	T	N	V	Y	C	N	L	T	P	E	Q	A	A	X	Y	K	A	E	V	E	N	L	F	N	N	I	D	S	V	T	G	I	K	R	K	G	X	I	L	S	T	L	L	K	L	K	Q	I	V	D	H	P	A	L	L	.	.
Template Known Secondary structure		T	T	T						T	T						T	T	S		S																										T	T	T	T	T	T			T																		T	T		T				.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		T	E	E	E	E	F	R	N	I	Y	N	M	T	V	T	Q	I	P	T	N	K	P	V	Q	R	N	D	K	S	D	L	I	Y	I	S	Q	K	G	K	F	D	A	V	V	E	D	V	V	E	K	H	K	A	G	Q	P	V	L	L	G	T	V	A	V	E	T	S	E	Y	I	S	N	L	L	K	K	R	.	G	I
Query Conservation																																																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	E	Q	S	V	R	R	S	G	K	X	I	R	T	X	E	I	I	E	E	A	L	D	E	G	D	K	I	A	I	F	T	Q	F	V	D	X	G	K	I	I	R	N	I	I	E	K	E	L	N	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S				S	T	T																T	T	T								S																	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		R	H	D	V	L	N	A	K	N	H	E	R	E	A	E	I	V	A	G	A	.	.	.	G	Q	K	G	A	V	T	I	A	T	N	M	A	G	R	G	T	D	I	K	L	G	E	G	V	E	E	L	G	G	L	A	V	I	G	T	E	R	H	E	S	R	R	I	D	D	Q	L	R	G	R	S	G	R	Q	G	D
Query Conservation																						.	.	.
Alig confidence																						.	.	.																					.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.																.	.	.
Template Sequence		E	V	P	F	L	Y	G	E	L	S	K	K	E	R	D	D	I	I	S	K	F	Q	N	N	P	S	V	K	F	I	V	L	S	V	K	A	G	F	G	I	N	L	T	.	.	.	.	.	.	.	.	S	A	N	R	V	I	H	F	D	R	W	W	N	P	D	.	.	.	Q	A	T	D	R	V	Y	R	I	G	Q
Template Known Secondary structure								T	T	S																T	T																	T	.	.	.	.	.	.	.	.	T		S					S	S			S				.	.	.					T	T	T	T	T	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.									.	.	.	820	.	.	.	.	.	.	.	.	.	830	.				.	.	.	.	.	.	.	.	840	.	.
		538	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	D	S	R	F	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	N	V	I	V	H
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		847	.	.	850	.	.	.