Phyre 2 alignment of O06446 with c3qmzA_

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Job Description | O06446
Confidence | 73.02% | Date | Tue Jul 17 17:05:02 BST 2012
Rank | 226 | Aligned Residues | 48
% Identity | 21% | Template | c3qmzA_
PDB info | PDB header:motor protein | Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; | PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain
Resolution | 6.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |  | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | Q | I | M | G | G | I | A | I | H | K | G | D | I | A | E | M | R | T | G | E | G | K | T | L | T | A | . | T | M | P | T | Y | L | N | A | L | A | G | R | G | V | H | V | I | T | V | N | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | Q | F | Y | Y | M | Q | K | T | Q | Q | A | L | I | L | V | G | K | A | G | C | G | K | T | A | T | W | K | T | V | I | D | A | M | A | I | F | D | G | H | A | N | V | V | Y | V | I | D | T
Template Known Secondary structure |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2058 | . | 2060 | . | . | . | . | . | . | . | . | . | 2070 | . | . | . | . | . | . | . | . | . | 2080 | . | . | . | . | . | . | . | . | . | 2090 | . | . | . | . | . | . | . | . | . | 2100 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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