Phyre 2 alignment of O06446 with c2gzaB_

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Job Description | O06446
Confidence | 49.02% | Date | Tue Jul 17 17:05:02 BST 2012
Rank | 280 | Aligned Residues | 45
% Identity | 22% | Template | c2gzaB_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:type iv secretion system protein virb11; | PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |  | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | Y | K | V | Q | I | M | G | G | I | A | I | H | K | G | D | . | I | A | E | M | R | T | G | E | G | K | T | L | T | A | T | M | P | T | Y | L | N | A | L | A | G | R | G | V | H | V | I | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | D | Y | M | S | F | L | R | R | A | V | Q | L | E | R | V | I | V | V | A | G | E | T | G | S | G | K | T | . | . | . | T | L | M | K | A | L | M | Q | E | I | P | F | D | Q | R | L | I | T
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | T | T | S | S |  |  | . | . | . |  |  |  |  |  |  |  | T | T | S |  | T | T | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |  |  |  | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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