Phyre 2 alignment of O06446 with c4f67A_

Return to main results | Retrieve Phyre Job Id

Job Description | O06446
Confidence | 23.79% | Date | Tue Jul 17 17:05:02 BST 2012
Rank | 409 | Aligned Residues | 35
% Identity | 14% | Template | c4f67A_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:upf0176 protein lpg2838; | PDBTitle: three dimensional structure of the double mutant of upf0176 protein2 lpg2838 from legionella pneumophila at the resolution 1.8a, northeast3 structural genomics consortium (nesg) target lgr82
Resolution | 1.79 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 433 | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |  | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query Sequence |  | K | A | G | Q | P | V | L | L | G | T | V | A | V | E | T | S | E | Y | I | S | N | L | L | K | K | R | G | I | R | . | H | D | V | L | N | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | K | D | K | K | I | A | X | F | C | T | G | G | I | R | C | E | K | T | T | A | Y | X | K | E | L | G | F | E | H | V | Y | Q | L | H | D
Template Known Secondary structure |  | G | T | T | S |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  | S | S |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions