Phyre 2 alignment of O06446 with c4etpA_

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Job Description | O06446
Confidence | 23.29% | Date | Tue Jul 17 17:05:02 BST 2012
Rank | 413 | Aligned Residues | 19
% Identity | 37% | Template | c4etpA_
PDB info | PDB header:motor protein | Chain: A: PDB Molecule:kinesin-like protein kar3; | PDBTitle: c-terminal motor and motor homology domain of kar3vik1 fused to a2 synthetic heterodimeric coiled coil
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 107 | . | . | 110 | . | . | . | . | . | . |  |  |  |  |  |  | . | . | . | 120 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | R | T | G | E | G | K | T | L | T | A | . | . | . | . | . | . | T | M | P | T | Y | L | N | A | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | T | G | S | G | K | T | F | T | M | L | N | P | G | D | G | I | I | P | S | T | I | S | H | I
Template Known Secondary structure |  |  | T | T | S | S |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 475 | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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