Phyre 2 alignment of O06446 with c2r2aB_

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Job Description | O06446
Confidence | 37.52% | Date | Tue Jul 17 17:05:02 BST 2012
Rank | 329 | Aligned Residues | 28
% Identity | 29% | Template | c2r2aB_
PDB info | PDB header:toxin | Chain: B: PDB Molecule:uncharacterized protein; | PDBTitle: crystal structure of n-terminal domain of zonular occludens toxin from2 neisseria meningitidis
Resolution | 1.82 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 130 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | R | T | G | E | G | K | T | L | T | A | T | M | P | T | Y | L | N | A | . | . | . | . | . | L | A | G | R | G | V | H | V | I | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | P | G | S | G | K | T | L | K | X | V | S | X | X | A | N | D | E | X | F | K | P | D | E | N | G | I | R | R | K | V | F | T
Template Known Secondary structure |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |  |  | T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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