Phyre 2 alignment of O06446 with c2ns5A_

Return to main results | Retrieve Phyre Job Id

Job Description | O06446
Confidence | 33.92% | Date | Tue Jul 17 17:05:02 BST 2012
Rank | 345 | Aligned Residues | 14
% Identity | 43% | Template | c2ns5A_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:partitioning-defective 3 homolog; | PDBTitle: the conserved n-terminal domain of par-3 adopts a novel pb1-2 like structure required for par-3 oligomerization and3 apical membrane localization
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 830 | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | 840 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | P | C | G | S | G | K | . | . | . | . | . | . | . | . | . | . | . | . | K | F | K | N | C | H | G | K
Query Conservation |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | C | G | D | G | R | M | K | V | F | S | L | I | Q | Q | A | V | T | R | Y | R | K | A | V | A | K
Template Known Secondary structure |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions