Return to main results Retrieve Phyre Job Id

Job DescriptionP52078
Confidence3.47%DateTue Jul 17 17:05:11 BST 2012
Rank81Aligned Residues10
% Identity50%Templated1tvfa1
SCOP infoPenicillin-binding protein associated domain Penicillin-binding protein associated domain Pencillin binding protein 4 (PbpD), C-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........
Predicted Secondary structure 



Query SS confidence 









Query Sequence  IKKGYQKLNG
Query Conservation 
  
 
 
 
Alig confidence 









Template Conservation 



 
 


Template Sequence  LSKGEQRING
Template Known Secondary structure 
STT
Template Predicted Secondary structure 





Template SS confidence 









   321........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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