Job Description P52078 Confidence 8.59% Date Tue Jul 17 17:05:11 BST 2012 Rank 23 Aligned Residues 37 % Identity 19% Template c3vp7A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 30; PDBTitle: crystal structure of the beta-alpha repeated, autophagy-specific2 (bara) domain of vps30/atg6 Resolution 2.30 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	H	A	H	A	Y	G	G	P	I	A	A	M	D	S	V	E	A	T	M	N	V	P	V	D	Y	Y	V	R	V	N	M	K	A	F	V	E	A
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		I	N	A	A	L	.	.	G	Q	L	I	L	L	L	A	T	I	N	K	N	L	K	I	N	L	V	D	Y	E	L	Q	P	M	G	S	F	S	K	I
Template Known Secondary structure							.	.														T	T				S	S							G	G	G
Template Predicted Secondary structure							.	.
Template SS confidence
		356	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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