Job Description P52078 Confidence 100.00% Date Tue Jul 17 17:05:11 BST 2012 Rank 2 Aligned Residues 263 % Identity 22% Template c3pe5B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: three-dimensional structure of protein a7vv38_9clot from clostridium2 leptum dsm 753, northeast structural genomics consortium target3 qlr103 Resolution 2.38 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	P	E	E	Q	P	I	S	I	L	F	L	G	I	D	D	N	D	G	R	R	K	K	G	Q	D	A	E	H	S	R	S	D	A	M	I	L	T	T	F	N	Q	S	K	H	Q	I	R	M	L	S	I	P	R	D	T	I	S	Y	I	P	K	V	G	Y	Y	D	K	I	T	H	A	H	A	Y	G	G	P
Query Conservation
Alig confidence																									.	.	.	.	.	.																																						.
Template Conservation																									.	.	.	.	.	.																																						.
Template Sequence		T	L	I	K	D	P	X	V	L	N	I	X	L	F	G	S	D	E	R	P	G	E	T	.	.	.	.	.	.	G	Y	G	R	S	D	T	X	X	L	L	S	I	D	N	R	N	K	K	L	K	L	T	S	F	X	R	D	T	Y	V	N	V	P	E	W	G	.	D	T	K	L	T	H	A	Y	S	Y	G	G	P
Template Known Secondary structure				B		B	T	T										S	B				S	S	.	.	.	.	.	.				B											T	T	T	T									T	T	B					T	T	T		.
Template Predicted Secondary structure																									.	.	.	.	.	.																																						.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		I	A	A	M	D	S	V	E	A	T	M	N	V	P	V	D	Y	Y	V	R	V	N	M	K	A	F	V	E	A	V	N	E	L	G	G	I	Y	Y	D	V	P	Y	D	L	N	E	.	.	P	N	T	D	D	T	G	K	I	K	I	K	K	G	Y	Q	K	L	N	G	D	E	A	L	A	V	A	R	T	R	H	H
Query Conservation																																																.	.
Alig confidence																																																.	.
Template Conservation
Template Sequence		A	L	A	I	E	T	I	E	R	N	F	G	I	D	I	D	R	Y	A	V	V	Y	F	D	T	F	P	G	I	V	D	T	L	G	G	I	E	V	E	X	T	Q	T	E	A	D	V	X	N	E	S	V	G	P	E	F	A	N	F	T	E	G	K	N	T	L	N	G	A	T	A	L	V	Y	V	R	I	R	Y	G
Template Known Secondary structure														B										G	G	G								T	T															T	T	S	S		S	S						S																			T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
			212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																												.	.
Query SS confidence		.																																																												.	.
Query Sequence		.	D	S	D	L	K	R	G	Q	R	Q	M	E	L	I	K	I	L	F	Q	K	A	Q	E	V	D	S	I	D	K	L	D	N	V	I	Q	I	V	G	K	N	A	K	H	N	L	T	N	S	E	I	K	A	L	A	K	M	Y	L	T	.	.	N	D	V	E	I	K	T	A	Q	L	K	G	K	D	D	M	L	N
Query Conservation		.																																																												.	.
Alig confidence		.																																																												.	.
Template Conservation
Template Sequence		V	G	D	D	F	G	R	T	Q	R	Q	R	D	F	X	L	Q	V	L	N	K	V	K	G	T	R	D	V	G	T	L	L	T	L	L	T	K	I	L	P	G	V	T	T	N	I	S	V	N	E	X	A	G	L	A	G	G	A	I	S	S	Y	X	D	Y	P	X	Y	Q	F	R	L	P	E	D	G	A	F	S	A
Template Known Secondary structure		T	T	T																					T															G	G	G				S																T	G	G	G	S								S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
							289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	G	I	Y	Y	Y	H	P	S	V	E	S	I	Q	K	Y	A	N	L	L	R	K	D	L	E	L	S	P	I	N	D	K	N	D	F	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		V	D	V	D	A	G	N	V	L	A	I	D	D	W	D	A	A	R	E	H	L	Q	R	F	I	Y	E	D	T	V	D	P	I	Y	G	P	S	T	E	T
Template Known Secondary structure					T	T							S															G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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