Job Description P52078 Confidence 100.00% Date Tue Jul 17 17:05:11 BST 2012 Rank 1 Aligned Residues 269 % Identity 27% Template c3okzB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein gbs0355; PDBTitle: crystal structure of protein gbs0355 from streptococcus agalactiae,2 northeast structural genomics consortium target sar127 Resolution 2.70 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		R	D	N	K	V	N	P	E	E	Q	P	I	S	I	L	F	L	G	I	D	D	N	D	G	R	R	K	K	G	Q	D	A	E	H	S	R	S	D	A	M	I	L	T	T	F	N	Q	S	K	H	Q	I	R	M	L	S	I	P	R	D	T	I	S	Y	I	P	K	V	G	Y	.	.	.	.	.	.	Y	D	K	I
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																												.	.	.																																										.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		S	K	S	H	A	I	E	E	T	K	P	F	S	I	L	L	X	G	V	D	T	G	S	E	H	R	.	.	.	K	S	K	W	S	G	N	S	D	S	X	I	L	V	T	I	N	P	K	T	N	K	T	T	X	T	S	L	E	R	D	V	L	I	K	L	S	G	P	K	N	N	G	Q	T	G	V	E	A	K	L
Template Known Secondary structure						T	T	T	T	T														S			S	.	.	.	T	T	S	S		S												T	T	T	T									T	T	B								S	S		T	T	T	T					T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		T	H	A	H	A	Y	G	G	P	I	A	A	M	D	S	V	E	A	T	M	N	V	P	V	D	Y	Y	V	R	V	N	M	K	A	F	V	E	A	V	N	E	L	G	G	I	Y	Y	D	V	P	Y	D	L	N	E	P	N	T	D	D	.	.	T	G	K	I	K	I	K	K	G	Y	Q	K	L	N	G	D	E	A
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		N	A	A	Y	A	S	G	G	A	E	X	A	L	X	T	V	Q	D	L	L	D	I	N	V	D	Y	F	X	Q	I	N	X	Q	G	L	V	D	L	V	N	A	V	G	G	I	T	V	T	N	K	F	D	F	P	I	S	I	A	A	N	E	P	E	Y	K	A	V	V	E	P	G	T	H	K	I	N	G	E	Q	A
Template Known Secondary structure		T					T	T														T	S																				T	T		B						S	S	S					T	T	T		T	T							B					B
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	A	V	A	R	T	R	H	H	D	.	.	S	D	L	K	R	G	Q	R	Q	M	E	L	I	K	I	L	F	Q	K	A	Q	E	V	D	S	I	D	K	L	D	N	V	I	Q	I	V	G	K	N	A	K	H	N	L	T	N	S	E	I	K	A	L	A	K	M	Y	L	T	N	D	V	E	I	K	T	A	Q	L
Query Conservation												.	.
Alig confidence												.	.																																																							.
Template Conservation																																																																				.
Template Sequence		L	V	Y	S	R	X	R	Y	D	D	P	E	G	D	Y	G	R	Q	K	R	Q	R	E	V	I	Q	K	V	L	K	K	I	L	A	L	N	S	I	S	S	Y	K	K	I	L	S	A	V	S	N	N	X	Q	T	N	I	E	I	K	T	I	P	N	L	L	A	.	Y	K	D	S	L	E	H	I	K	S	Y	Q	L
Template Known Secondary structure					T	T			T	T		T	T	T																																				S	T	T				S										G	G	.	G	T	T	T	T	T	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.
		281	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		K	G	K	D	D	M	L	.	N	G	I	Y	Y	Y	H	P	S	V	E	S	I	Q	K	Y	A	N	L	L	R	K	D	L	E	L	S	P	I	N	D	K	N	D	F	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		K	G	E	D	A	T	L	S	D	G	G	S	Y	Q	I	L	T	K	K	H	L	L	A	V	Q	N	R	I	K	K	E	L	D	K	K	R	S	K	T	L	K	T	S	A
Template Known Secondary structure									S	S	S																						T	T					S	S				S	B
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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