 |
| Job Description | P31337 | | Confidence | 86.30% | Date | Tue Jul 17 17:05:10 BST 2012 |
| Rank | 44 | Aligned Residues | 41 |
| % Identity | 27% | Template | d1doqa_ |
| SCOP info | SAM domain-like
| C-terminal domain of RNA polymerase alpha subunit
| C-terminal domain of RNA polymerase alpha subunit
|
| Resolution | UNK |
|
|   |   |
37 | . | . | 40 | . | . | . | . | . | |
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | N | E | L | L | K | S | A | S | . |
. |
N | L | N | E | L | K | K | S | S | I | N | D | L | I | K | V | K | G | I | G | L | Q | K | A | I | T | L | K | A | A | F | E |
| Query Conservation |   |
|   |   |
|
|   |   |
|
| . | . |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |
|   |   |   |
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|
|
|   |
|
|   |   |   |
|   |
| Template Sequence |   |
V | L | H | S | L | K | E | E | G | I | E | S | V | R | A | L | L | A | L | N | L | K | D | L | K | N | I | P | G | I | G | E | R | S | L | E | E | I | K | E | A | L | E |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  | S |
|  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|