Job Description P31337 Confidence 28.97% Date Tue Jul 17 17:05:10 BST 2012 Rank 106 Aligned Residues 67 % Identity 18% Template c3kntC_ PDB info PDB header:hydrolase, lyase/dna Chain: C: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: crystal structure of methanocaldococcus jannaschii 8-2 oxoguanine glycosylase/lyase in complex with 15mer dna3 containing 8-oxoguanine Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.	.																																			.	.	.	.	.	.
Query SS confidence																			.	.																																			.	.	.	.	.	.
Query Sequence		L	S	H	G	A	K	S	L	S	N	T	E	L	L	A	I	L	.	.	I	N	T	G	R	K	G	F	S	S	I	D	I	S	N	E	L	L	K	S	A	S	N	L	N	E	L	K	K	S	S	I	N	D	.	.	.	.	.	.	L	I	K	V	K	G	I	G	L	Q	K	A	I	T	L	K	A
Query Conservation																			.	.																																			.	.	.	.	.	.
Alig confidence																			.	.														.																					.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		I	G	D	G	F	L	T	L	P	R	E	E	L	E	E	K	L	K	N	L	G	H	R	F	Y	R	K	R	A	E	Y	I	.	V	L	A	R	R	F	K	N	I	K	D	I	V	E	S	F	E	N	E	K	V	A	R	E	F	L	V	R	N	I	K	G	I	G	Y	Q	E	A	S	H	F	L	R
Template Known Secondary structure			T	T					S												T	T		T	T									.			G	G	G	G										S	S	S												S	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions