 |
| Job Description | P31337 | | Confidence | 47.30% | Date | Tue Jul 17 17:05:10 BST 2012 |
| Rank | 85 | Aligned Residues | 58 |
| % Identity | 10% | Template | c1mpgB_ |
| PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; |
PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli
|
| Resolution | 1.80 Å |
|
 |
|   |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | L | A | I | L | I | N | T | G | R | K | G | F | S | S | I | D | I | S | N | E | L | L | K | S | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | L | N | E | L | K | K | S | S | I | N | D | L | I | K | V | K | G | I | G | L | Q | K | A | I | T | L | K | A | A | F | E |
| Query Conservation |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   | . |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |
| Template Sequence |   |
G | V | R | A | I | L | G | Q | L | V | S | V | A | M | A | A | K | L | T | A | R | V | A | Q | L | Y | G | E | R | L | D | D | F | P | E | Y | I | C | F | P | T | P | Q | R | L | A | A | A | D | P | Q | A | L | K | A | L | . |
G | M | P | L | K | R | A | E | A | L | I | H | L | A | N |
| Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| B |
| S | S | S | T | T |
| B |
|
|
|
|  |  |  |  |  | S | S |
|  |  |  |  |  |  | T | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|