Emaill.a.kelley@imperial.ac.uk
DescriptionO08387
DateTue Jul 17 17:05:02 BST 2012
Unique Job ID8394b0217ec82c09

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3j01A_



100.0 41 PDB header:ribosome/ribosomal protein
Chain: A: PDB Molecule:preprotein translocase secy subunit;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
2c2zqpY_



100.0 38 PDB header:protein transport
Chain: Y: PDB Molecule:preprotein translocase secy subunit;
PDBTitle: crystal structure of secye translocon from thermus2 thermophilus
3c3dl8H_



100.0 42 PDB header:protein transport
Chain: H: PDB Molecule:preprotein translocase subunit secy;
PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca
4c3dinF_



100.0 39 PDB header:membrane protein, protein transport
Chain: F: PDB Molecule:preprotein translocase subunit secy;
PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase
5c2wwbA_



100.0 21 PDB header:ribosome
Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1;
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome
6c2akiY_



100.0 42 PDB header:protein transport
Chain: Y: PDB Molecule:preprotein translocase secy subunit;
PDBTitle: normal mode-based flexible fitted coordinates of a2 translocating secyeg protein-conducting channel into the3 cryo-em map of a secyeg-nascent chain-70s ribosome complex4 from e. coli
7c2wwaA_



100.0 19 PDB header:ribosome
Chain: A: PDB Molecule:sec sixty-one protein homolog;
PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome
8d1rh5a_



100.0 20 Fold:Preprotein translocase SecY subunit
Superfamily:Preprotein translocase SecY subunit
Family:Preprotein translocase SecY subunit
9c3mp7A_



100.0 22 PDB header:protein transport
Chain: A: PDB Molecule:preprotein translocase subunit secy;
PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes
10c2nscA_



71.6 28 PDB header:chaperone
Chain: A: PDB Molecule:trigger factor;
PDBTitle: structures of and interactions between domains of trigger factor from2 themotoga maritima
11d1t11a2



66.4 16 Fold:Ribosome binding domain-like
Superfamily:Trigger factor ribosome-binding domain
Family:Trigger factor ribosome-binding domain
12d1p9ya_



65.2 13 Fold:Ribosome binding domain-like
Superfamily:Trigger factor ribosome-binding domain
Family:Trigger factor ribosome-binding domain
13d1w26a2



56.7 13 Fold:Ribosome binding domain-like
Superfamily:Trigger factor ribosome-binding domain
Family:Trigger factor ribosome-binding domain
14c2d3o1_



48.8 31 PDB header:ribosome
Chain: 1: PDB Molecule:trigger factor;
PDBTitle: structure of ribosome binding domain of the trigger factor2 on the 50s ribosomal subunit from d. radiodurans
15c1w26B_



45.3 25 PDB header:chaperone
Chain: B: PDB Molecule:trigger factor;
PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins
16c1t11A_



39.4 14 PDB header:chaperone
Chain: A: PDB Molecule:trigger factor;
PDBTitle: trigger factor
17d1zl8a1



19.8 32 Fold:L27 domain
Superfamily:L27 domain
Family:L27 domain
18d1wmxb_



18.0 33 Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat)
19d1y74a1



16.3 27 Fold:L27 domain
Superfamily:L27 domain
Family:L27 domain
20d1ebfa2



11.5 29 Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Homoserine dehydrogenase-like
21d1wpga4



not modelled 10.9 13 Fold:Calcium ATPase, transmembrane domain M
Superfamily:Calcium ATPase, transmembrane domain M
Family:Calcium ATPase, transmembrane domain M
22c3ku7B_



not modelled 10.7 25 PDB header:cell cycle
Chain: B: PDB Molecule:cell division topological specificity factor;
PDBTitle: crystal structure of helicobacter pylori mine, a cell division2 topological specificity factor
23c2l02B_



not modelled 8.0 18 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of protein bt2368 from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr375
24d1to9a_



not modelled 7.9 19 Fold:Heme oxygenase-like
Superfamily:Heme oxygenase-like
Family:TENA/THI-4
25c1to9A_



not modelled 7.9 19 PDB header:biosynthetic protein
Chain: A: PDB Molecule:thi-4 protein;
PDBTitle: crystal structure of thi-4 protein from bacillus subtilis
26d2jdid1



not modelled 7.5 12 Fold:Left-handed superhelix
Superfamily:C-terminal domain of alpha and beta subunits of F1 ATP synthase
Family:C-terminal domain of alpha and beta subunits of F1 ATP synthase
27c3kpaB_



not modelled 7.5 21 PDB header:ligase
Chain: B: PDB Molecule:probable ubiquitin fold modifier conjugating enzyme;
PDBTitle: ubiquitin fold modifier conjugating enzyme from leishmania major2 (probable)
28c3okqA_



not modelled 7.1 19 PDB header:protein binding
Chain: A: PDB Molecule:bud site selection protein 6;
PDBTitle: crystal structure of a core domain of yeast actin nucleation cofactor2 bud6
29d1qd1a2



not modelled 6.7 21 Fold:Ferredoxin-like
Superfamily:Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Family:Formiminotransferase domain of formiminotransferase-cyclodeaminase.
30c1mhsA_



not modelled 6.6 13 PDB header:membrane protein, proton transport
Chain: A: PDB Molecule:plasma membrane atpase;
PDBTitle: model of neurospora crassa proton atpase
31d1jjcb1



not modelled 6.5 23 Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Domains B1 and B5 of PheRS-beta, PheT
32d1iqoa_



not modelled 6.4 21 Fold:Hypothetical protein MTH1880
Superfamily:Hypothetical protein MTH1880
Family:Hypothetical protein MTH1880
33d2huec1



not modelled 6.3 29 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
34d1zq1c1



not modelled 6.2 37 Fold:GatB/YqeY motif
Superfamily:GatB/YqeY motif
Family:GatB/GatE C-terminal domain-like
35d1uara1



not modelled 6.1 10 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
36d2gycf1



not modelled 5.9 22 Fold:Ribosomal protein L9 C-domain
Superfamily:Ribosomal protein L9 C-domain
Family:Ribosomal protein L9 C-domain
37c3qxlB_



not modelled 5.9 27 PDB header:signaling protein
Chain: B: PDB Molecule:ras-specific guanine nucleotide-releasing factor ralgps1;
PDBTitle: crystal structure of the cdc25 domain from ral-specific guanine-2 nucleotide exchange factor ralgps1a
38c2voyK_



not modelled 5.8 22 PDB header:hydrolase
Chain: K: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium
PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus
39c4a01B_



not modelled 5.8 14 PDB header:hydrolase
Chain: B: PDB Molecule:proton pyrophosphatase;
PDBTitle: crystal structure of the h-translocating pyrophosphatase
40d1zrra1



not modelled 5.7 14 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Acireductone dioxygenase
41c3hlsE_



not modelled 5.6 33 PDB header:signaling protein
Chain: E: PDB Molecule:guanylate cyclase soluble subunit beta-1;
PDBTitle: crystal structure of the signaling helix coiled-coil doimain2 of the beta-1 subunit of the soluble guanylyl cyclase
42c3mvuA_



not modelled 5.5 8 PDB header:transcription regulator
Chain: A: PDB Molecule:tena family transcriptional regulator;
PDBTitle: crystal structure of a tena family transcription regulator2 (tm1040_3656) from silicibacter sp. tm1040 at 1.80 a resolution
43c3gxxB_



not modelled 5.5 29 PDB header:transcription
Chain: B: PDB Molecule:transcription elongation factor spt6;
PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
44d2fiqa1



not modelled 5.4 25 Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:GatZ-like
45c1uv7A_



not modelled 5.1 21 PDB header:transport
Chain: A: PDB Molecule:general secretion pathway protein m;
PDBTitle: periplasmic domain of epsm from vibrio cholerae
46d1uv7a_



not modelled 5.1 21 Fold:RRF/tRNA synthetase additional domain-like
Superfamily:General secretion pathway protein M, EpsM
Family:General secretion pathway protein M, EpsM