Job Description O08387 Confidence 5.77% Date Tue Jul 17 17:05:02 BST 2012 Rank 39 Aligned Residues 348 % Identity 14% Template c4a01B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:proton pyrophosphatase; PDBTitle: crystal structure of the h-translocating pyrophosphatase Resolution 2.35 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		I	V	P	Y	I	T	A	S	I	V	M	Q	L	L	Q	M	D	I	V	P	K	F	S	E	W	A	K	Q	G	E	V	G	R	R	K	L	N	N	V	T	R	Y	L	A	I	S	L	A	F	I	Q	S	I	G	M	A	F	Q	F	.	.	.	.	N	N	Y	L	K	G	A	L	I	I	N	Q	S	I	M	S	Y
Query Conservation																																																													.	.	.	.
Alig confidence																																																													.	.	.	.
Template Conservation
Template Sequence		L	Y	P	L	I	V	S	S	V	G	I	L	V	C	L	L	T	T	L	F	A	T	D	F	F	E	I	K	A	V	K	E	I	E	P	A	L	K	K	Q	L	V	I	S	T	V	L	M	T	I	G	V	A	V	V	S	F	V	A	L	P	T	S	F	T	I	F	N	F	G	V	Q	K	D	V	K	S	W	Q	L
Template Known Secondary structure		T																						T	S					S	G	G	G																												S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	I	A	L	V	L	T	A	G	T	A	F	L	I	W	L	G	D	Q	I	T	Q	F	G	V	G	.	.	.	.	.	.	.	.	.	.	N	G	I	S	I	I	I	F	A	G	I	L	S	T	L	P	A	S	L	I	Q	F	G	Q	T	A	F	V	G	Q	E	D	T	S	L	A	W	L	K	V	L	G	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	C	V	A	V	G	L	W	A	G	L	I	I	G	F	V	T	E	Y	Y	T	S	N	A	Y	S	P	V	Q	D	V	A	D	S	C	R	T	G	A	A	T	N	V	I	F	G	L	A	L	G	Y	K	S	V	I	I	P	I	F	A	I	A	I	S	I	F	V	S	F	T	F	A	A	M	Y	G	I	A	V
Template Known Secondary structure																									T	T	S									G	G	G	G																	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		L	V	S	L	I	L	L	T	V	G	A	I	Y	V	L	E	A	V	R	K	I	P	I	Q	Y	A	K	K	Q	T	A	Q	R	L	G	S	Q	A	T	Y	L	P	L	K	V	N	S	A	G	V	I	.	.	.	.	.	.	P	V	I	F	A	M	A	F	F	L	L	P	R	T	L	T	L	F	Y	P	D	K	E
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	L	G	M	L	S	T	I	A	T	G	L	A	I	D	A	Y	G	P	I	S	D	N	A	G	G	I	A	E	M	A	G	M	S	H	R	I	R	E	R	T	D	A	L	D	A	A	G	N	T	T	A	A	I	G	K	G	F	A	I	G	S	A	A	L	V	S	L	A	L	F	G	A	F	V	S	R	A	S
Template Known Secondary structure							T	T	T																									T																																														T	T
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																					.																																.	.
Query SS confidence																																					.																																.	.
Query Sequence		W	A	Q	N	I	A	N	A	A	N	P	S	S	N	V	G	M	V	V	Y	I	V	L	I	I	L	F	T	Y	F	Y	A	F	V	Q	.	V	N	P	E	K	M	A	D	N	L	K	K	Q	G	S	Y	V	P	G	I	R	P	G	E	Q	T	K	K	Y	I	T	.	.	K	V	L	Y	R	L	T	F	V	G	S
Query Conservation																																					.																																.	.
Alig confidence					.	.																															.																																.	.
Template Conservation					.	.
Template Sequence		I	T	T	.	.	V	D	V	L	T	P	K	V	F	I	G	L	I	V	G	A	M	L	P	Y	W	F	S	A	M	T	M	K	S	V	G	S	A	A	L	K	M	V	E	E	V	R	R	Q	F	N	T	I	P	G	L	M	E	G	T	A	K	P	D	Y	A	T	C	V	K	I	S	T	D	A	S	I	K	E	M
Template Known Secondary structure			S		.	.			T	T	S																																											S	T	T	T	T	T	T	S	S																			T
Template Predicted Secondary structure					.	.
Template SS confidence
		565	.	.			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		372	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		I	F	L	A	V	I	S	I	L	.	P	I	L	A	T	K	F	M	G	L	P	Q	S	I	Q	I	G	G	T	S	L	L	I	V	I	G	V	A	I	E	T	M	K	S	L	E	A	Q	V	S	Q	K	E	Y
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		I	P	P	G	A	L	V	M	L	T	P	L	V	V	G	I	L	F	G	V	E	T	L	S	G	V	L	A	G	S	L	V	S	G	V	Q	I	A	I	S	A	S	N	T	G	G	A	W	D	N	A	K	K	Y
Template Known Secondary structure																			T
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions