Return to main results Retrieve Phyre Job Id

Job DescriptionO08387
Confidence4.76%DateTue Jul 17 17:05:02 BST 2012
Rank49Aligned Residues26
% Identity15%Templatec3kdpD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1; PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320......... 330....
Predicted Secondary structure 
..

Query SS confidence 




















. .




Query Sequence  VGMVVYIVLIILFTYFYAFVQ. . VNPEK
Query Conservation       
  


 
  
 
 
 ..  
  
Alig confidence 




















..




Template Conservation 

 


  

  

  
 
   

    
Template Sequence  FYVIFYGCLAGIFIGTIQVMLLTISEFK
Template Known Secondary structure  GGGS
S
SSS
Template Predicted Secondary structure 




Template SS confidence 



























   38.40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions