Email l.a.kelley@imperial.ac.uk Description P60611 Date Tue Jul 17 17:05:12 BST 2012 Unique Job ID 7474bb93d2b7beac

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2qv0A_ 100.0 37 PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae 2 c3eq2A_ 99.9 23 PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb 3 c2ayxA_ 99.9 25 PDB header:transferase Chain: A: PDB Molecule:sensor kinase protein rcsc; PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain 4 c3breA_ 99.9 15 PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702 5 d1ny5a1 99.9 28 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 6 c1ny5A_ 99.9 27 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state 7 c1w25B_ 99.9 20 PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp 8 c3b2nA_ 99.9 22 PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus 9 c3cu5B_ 99.9 27 PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg 10 d2ayxa1 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 11 c3i5aA_ 99.9 13 PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae 12 d1kgsa2 99.9 21 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 13 d1jbea_ 99.9 29 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 14 c3eulB_ 99.9 24 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 15 d1dz3a_ 99.9 28 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 16 d1ys7a2 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 17 d1qkka_ 99.9 26 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 18 c3dzdA_ 99.9 24 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state 19 c1a2oB_ 99.9 21 PDB header:bacterial chemotaxis Chain: B: PDB Molecule:cheb methylesterase; PDBTitle: structural basis for methylesterase cheb regulation by a2 phosphorylation-activated domain 20 c3r0jA_ 99.9 23 PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis 21 d1s8na_ not modelled 99.9 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 22 d1a04a2 not modelled 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 23 c4e7pA_ not modelled 99.9 25 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of receiver domain of putative narl family response2 regulator spr1814 from streptococcus pneumoniae in the presence of3 the phosphoryl analog beryllofluoride 24 d1u0sy_ not modelled 99.9 35 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 25 c2rjnA_ not modelled 99.9 19 PDB header:hydrolase Chain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis 26 c3cfyA_ not modelled 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus 27 d2a9pa1 not modelled 99.9 33 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 28 d1w25a1 not modelled 99.9 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 29 d1mvoa_ not modelled 99.9 32 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 30 c3hdgE_ not modelled 99.9 24 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of an2 uncharacterized protein (ws1339) from wolinella3 succinogenes 31 c3cnbC_ not modelled 99.9 20 PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h 32 d1yioa2 not modelled 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 33 d1dbwa_ not modelled 99.9 26 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 34 c3cz5B_ not modelled 99.9 26 PDB header:transcription regulator Chain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1 35 d2pl1a1 not modelled 99.9 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 36 d1peya_ not modelled 99.9 29 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 37 d1a2oa1 not modelled 99.9 19 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 38 c3hv2B_ not modelled 99.9 18 PDB header:signaling protein Chain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5 39 c2zwmA_ not modelled 99.9 32 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis 40 c3hebB_ not modelled 99.9 20 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum 41 d1heya_ not modelled 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 42 c3t8yA_ not modelled 99.9 23 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of the response regulator domain of thermotoga2 maritima cheb 43 d1k66a_ not modelled 99.9 19 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 44 c3jteA_ not modelled 99.9 28 PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum 45 d1krwa_ not modelled 99.9 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 46 c2qvgA_ not modelled 99.9 18 PDB header:transferase Chain: A: PDB Molecule:two component response regulator; PDBTitle: the crystal structure of a two-component response regulator2 from legionella pneumophila 47 c3khtA_ not modelled 99.9 20 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis 48 c2jrlA_ not modelled 99.9 25 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer 49 c3gt7A_ not modelled 99.9 23 PDB header:hydrolase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of signal receiver domain of signal2 transduction histidine kinase from syntrophus3 aciditrophicus 50 c1kgsA_ not modelled 99.9 17 PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima 51 d1zh2a1 not modelled 99.9 28 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 52 d1p6qa_ not modelled 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 53 c3nhzA_ not modelled 99.9 28 PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra 54 c3rqiA_ not modelled 99.9 23 PDB header:transcription Chain: A: PDB Molecule:response regulator protein; PDBTitle: crystal structure of a response regulator protein from burkholderia2 pseudomallei with a phosphorylated aspartic acid, calcium ion and3 citrate 55 c2qr3A_ not modelled 99.9 17 PDB header:transcription Chain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis 56 c3h1gA_ not modelled 99.9 30 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori 57 c2gwrA_ not modelled 99.9 28 PDB header:signaling protein Chain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis 58 c2zayA_ not modelled 99.9 18 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans 59 c3crnA_ not modelled 99.9 23 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver domain protein, chey-like; PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 60 d1zesa1 not modelled 99.9 27 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 61 c1ys7B_ not modelled 99.9 24 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ 62 c2qzjC_ not modelled 99.9 30 PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile 63 d1zgza1 not modelled 99.9 25 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 64 d1i3ca_ not modelled 99.9 18 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 65 d2r25b1 not modelled 99.9 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 66 c3t6kB_ not modelled 99.9 28 PDB header:signaling protein Chain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution 67 d1p2fa2 not modelled 99.9 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 68 c2jk1A_ not modelled 99.9 13 PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain 69 c3kcnA_ not modelled 99.9 18 PDB header:lyase Chain: A: PDB Molecule:adenylate cyclase homolog; PDBTitle: the crystal structure of adenylate cyclase from2 rhodopirellula baltica 70 c3f6cB_ not modelled 99.9 26 PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli 71 c1p2fA_ not modelled 99.9 22 PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog 72 d1mb3a_ not modelled 99.9 21 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 73 c3ilhA_ not modelled 99.9 22 PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii 74 d1xhfa1 not modelled 99.9 26 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 75 c4dadA_ not modelled 99.9 15 PDB header:signaling protein, signal transduction Chain: A: PDB Molecule:putative pilus assembly-related protein; PDBTitle: crystal structure of a putative pilus assembly-related protein2 (bpss2195) from burkholderia pseudomallei k96243 at 2.50 a resolution 76 c3a0rB_ not modelled 99.9 34 PDB header:transferase Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) 77 c3lteH_ not modelled 99.9 19 PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri 78 c3q9sA_ not modelled 99.9 29 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra(1-215) from deinococcus radiodurans 79 c3cg4A_ not modelled 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 80 c3m6mF_ not modelled 99.9 19 PDB header:lyase/transferase Chain: F: PDB Molecule:sensory/regulatory protein rpfc; PDBTitle: crystal structure of rpff complexed with rec domain of rpfc 81 c3i42A_ not modelled 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey- PDBTitle: structure of response regulator receiver domain (chey-like)2 from methylobacillus flagellatus 82 c3mmnA_ not modelled 99.9 23 PDB header:transferase Chain: A: PDB Molecule:histidine kinase homolog; PDBTitle: crystal structure of the receiver domain of the histidine kinase cki12 from arabidopsis thaliana complexed with mg2+ 83 c3cg0A_ not modelled 99.9 23 PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding 84 c2qxyB_ not modelled 99.9 23 PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima 85 c2rdmB_ not modelled 99.9 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419 86 c3grcD_ not modelled 99.9 21 PDB header:transferase Chain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666 87 d2b4aa1 not modelled 99.9 18 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 88 c3hdvB_ not modelled 99.9 25 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator receiver protein from2 pseudomonas putida 89 c3hzhA_ not modelled 99.9 23 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis response regulator (chey-3); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi 90 c3n0rA_ not modelled 99.9 27 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution 91 d1k68a_ not modelled 99.9 18 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 92 c3eqzB_ not modelled 99.9 26 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from colwellia2 psychrerythraea 93 c3c3mA_ not modelled 99.9 26 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1 94 c1zn2A_ not modelled 99.9 24 PDB header:transcription regulator Chain: A: PDB Molecule:response regulatory protein; PDBTitle: low resolution structure of response regulator styr 95 c2oqrA_ not modelled 99.9 27 PDB header:transcription,signaling protein Chain: A: PDB Molecule:sensory transduction protein regx3; PDBTitle: the structure of the response regulator regx3 from mycobacterium2 tuberculosis 96 c3nhmA_ not modelled 99.9 21 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from myxococcus xanthus 97 c3gl9B_ not modelled 99.9 27 PDB header:signaling protein Chain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism 98 c3c97A_ not modelled 99.9 21 PDB header:signaling protein, transferase Chain: A: PDB Molecule:signal transduction histidine kinase; PDBTitle: crystal structure of the response regulator receiver domain2 of a signal transduction histidine kinase from aspergillus3 oryzae 99 d1w25a2 not modelled 99.9 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 100 c3snkA_ not modelled 99.8 15 PDB header:signaling protein Chain: A: PDB Molecule:response regulator chey-like protein; PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution 101 c2hqrA_ 99.8 15 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 102 c2hqoA_ not modelled 99.8 22 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 103 c3h5iA_ not modelled 99.8 22 PDB header:transcription Chain: A: PDB Molecule:response regulator/sensory box protein/ggdef PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans 104 c3eodA_ not modelled 99.8 25 PDB header:signaling protein Chain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb 105 c3luaA_ not modelled 99.8 28 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum 106 c2j48A_ not modelled 99.8 14 PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. 107 d1dcfa_ not modelled 99.8 18 Fold:Flavodoxin-like Superfamily:CheY-like Family:Receiver domain of the ethylene receptor 108 c2qsjB_ not modelled 99.8 24 PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi 109 c2nt3A_ not modelled 99.8 20 PDB header:signaling protein Chain: A: PDB Molecule:response regulator homolog; PDBTitle: receiver domain from myxococcus xanthus social motility protein frzs2 (y102a mutant) 110 c3ktoA_ not modelled 99.8 21 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein2 from pseudoalteromonas atlantica 111 d1qo0d_ not modelled 99.8 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:Positive regulator of the amidase operon AmiR 112 c3kyiB_ not modelled 99.8 22 PDB header:transferase Chain: B: PDB Molecule:chey6 protein; PDBTitle: crystal structure of the phosphorylated p1 domain of chea3 in complex2 with chey6 from r. sphaeroides 113 c3lufB_ not modelled 99.8 20 PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein 114 c3d6wA_ 99.8 21 PDB header:dna binding protein Chain: A: PDB Molecule:methyl-accepting/dna response regulator; PDBTitle: lyttr dna-binding domain of putative methyl-accepting/dna response2 regulator from bacillus cereus. 115 c3c3wB_ not modelled 99.7 27 PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr 116 c1rnlA_ not modelled 99.7 25 PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl 117 c3n53B_ not modelled 99.7 31 PDB header:transcription Chain: B: PDB Molecule:response regulator receiver modulated diguanylate cyclase; PDBTitle: crystal structure of a response regulator receiver modulated2 diguanylate cyclase from pelobacter carbinolicus 118 c2yxbA_ not modelled 99.6 14 PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix 119 c3cwoX_ not modelled 99.6 22 PDB header:de novo protein Chain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds 120 c3bs1A_ not modelled 99.5 15 PDB header:transcription regulator Chain: A: PDB Molecule:accessory gene regulator protein a; PDBTitle: structure of the staphylococcus aureus agra lyttr domain2 bound to dna reveals a beta fold with a novel mode of3 binding