Job Description P60611 Confidence 20.96% Date Tue Jul 17 17:05:12 BST 2012 Rank 264 Aligned Residues 91 % Identity 10% Template c3n0wA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc branched chain amino acid family transporter, PDBTitle: crystal structure of a branched chain amino acid abc transporter2 periplasmic ligand-binding protein (bxe_c0949) from burkholderia3 xenovorans lb400 at 1.88 a resolution Resolution 1.88 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure										.	.	.	.																							.	.	.	.	.
Query SS confidence										.	.	.	.																							.	.	.	.	.
Query Sequence		K	A	L	I	I	D	D	E	.	.	.	.	P	L	A	R	N	E	L	T	Y	L	L	N	E	I	G	G	F	E	E	I	N	E	.	.	.	.	.	A	E	N	V	K	E	T	L	E	A	L	L	I	N	Q	Y	D	I	I	F	L	D	V	N	L	M	D	E	N	G	I	E	L	G	A	K	I	Q	K	M	K
Query Conservation										.	.	.	.																							.	.	.	.	.
Alig confidence										.	.	.	.																							.	.	.	.	.																						.	.
Template Conservation																																																														.	.
Template Sequence		T	W	F	L	X	L	P	D	A	A	Y	G	D	L	X	N	A	A	I	R	R	E	L	T	A	G	G	G	Q	I	V	G	S	V	R	F	P	F	E	T	Q	D	F	S	S	Y	L	L	Q	A	K	A	S	G	A	Q	L	I	V	S	.	.	T	S	G	G	A	A	N	I	N	I	X	K	Q	A	R	E	F	G
Template Known Secondary structure									S	S																		T											T	T															T		S					.	.																	T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	P	A	I	I	F	A	T	A	H	D	Q	Y	A	V	Q	A	F	E	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	S	K	T	Q	K	V	G	G	X	I	D	I	L	T	D	V	K	S	A	G
Template Known Secondary structure			S		S	S							B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions