Job Description P60611 Confidence 99.77% Date Tue Jul 17 17:05:12 BST 2012 Rank 114 Aligned Residues 107 % Identity 21% Template c3d6wA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:methyl-accepting/dna response regulator; PDBTitle: lyttr dna-binding domain of putative methyl-accepting/dna response2 regulator from bacillus cereus. Resolution 2.40 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	S	L	P	V	E	I	D	D	K	I	H	M	L	K	Q	Q	N	I	I	G	I	G	T	H	N	G	I	T	T	I	H	T	T	N	H	K	Y	E	T	T	E	P	L	N	R	Y	E	K	R	L	N	P	T	Y	F	I	R	I	H	R	S	Y	I	I	N	T	K	H	I	K	E	V	Q	Q	W	F	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	V	V	T	L	K	T	T	D	G	W	I	P	V	P	F	S	K	V	X	Y	L	E	A	K	D	K	K	T	Y	V	N	A	E	E	L	T	G	T	H	K	Y	S	L	Q	E	F	E	Y	L	L	P	K	D	S	F	I	R	C	H	R	S	F	I	V	N	V	N	H	I	K	A	I	Y	P	D	T	H	S
Template Known Secondary structure										S	S	S						G	G	G								T	T							S	S						S	S									S		T	T	T						T	T					G	G	G								S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	M	V	I	L	T	N	G	V	K	M	Q	V	G	R	S	F	M	K	D	F	K	A	S	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	L	L	S	X	D	N	G	E	R	V	P	V	S	Q	S	Y	A	S	Y	F	R	K	L	L	G
Template Known Secondary structure								T	T	S							T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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