Job Description P60611 Confidence 99.90% Date Tue Jul 17 17:05:12 BST 2012 Rank 39 Aligned Residues 115 % Identity 32% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	I	I	D	D	E	P	L	A	R	N	E	L	T	Y	L	L	N	E	I	G	G	F	E	E	I	N	E	A	E	N	V	K	E	T	L	E	A	L	L	I	N	Q	Y	D	I	I	F	L	D	V	N	L	M	D	E	N	G	I	E	L	G	A	K	I	Q	K	M	K	E	P	P	A	I	I	F	A	T
Query Conservation
Alig confidence																									.	.																																													.
Template Conservation																									.	.																																													.
Template Sequence		K	I	L	V	V	D	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	G	.	.	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	.	K	Y	D	M	P	I	I	M	L	T
Template Known Secondary structure								S																T	.	.								S														S						T	T		S	S	S												.				S
Template Predicted Secondary structure																									.	.																																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.
		82	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		A	H	D	Q	.	.	Y	A	V	Q	A	F	E	L	N	A	T	D	Y	I	L	K	P	F	G	Q	K	R	I	E	Q	A	V	N	K	V	R	A	T	K
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		A	K	D	S	E	I	D	K	V	I	G	L	E	I	G	A	D	D	Y	V	T	K	P	F	S	T	R	E	L	L	A	R	V	K	A	N	L	R	R	Q
Template Known Secondary structure			T	T											T	T								S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions