Job Description P60611 Confidence 51.06% Date Tue Jul 17 17:05:12 BST 2012 Rank 175 Aligned Residues 81 % Identity 9% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																										.	.	.	.																																					.	.	.	.	.
Query SS confidence																										.	.	.	.																																					.	.	.	.	.
Query Sequence		K	A	L	I	I	D	D	E	P	L	A	R	N	E	L	T	Y	L	L	N	E	I	G	G	.	.	.	.	F	E	E	I	N	E	A	E	N	V	K	E	T	L	E	A	L	L	I	N	Q	Y	D	I	I	F	L	D	V	N	L	M	D	E	N	G	.	.	.	.	.	I	E	L	G	A	K	I	Q	K	M	K
Query Conservation																										.	.	.	.																																					.	.	.	.	.
Alig confidence																										.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	L	K	N	A	A	E	G	S	Y	D	A	V	I	V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q	S	V	A	R	A	L
Template Known Secondary structure																					T	T	T	G	G	G	T	T		T	T						S								S	S		S	S												S	S	S	G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	P	A	I	I	F	A	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	G	G	V	V	C	T	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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