Job Description P60611 Confidence 22.52% Date Tue Jul 17 17:05:12 BST 2012 Rank 252 Aligned Residues 90 % Identity 11% Template c2i2aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase 1; PDBTitle: crystal structure of lmnadk1 from listeria monocytogenes Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		M	K	A	L	I	I	D	D	E	P	L	A	R	N	E	L	T	Y	L	L	N	E	I	G	G	F	E	E	I	N	E	A	E	N	V	K	E	T	L	E	A	L	L	I	N	Q	Y	D	I	I	F	L	D	V	N	L	M	D	E	N	G	I	.	.	E	L	G	A	K	I	Q	K	M	K	E	P	P	A	I	I
Query Conservation																																																																.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.	.						.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		M	K	Y	M	I	T	S	K	G	D	E	K	S	D	L	L	R	L	N	M	I	A	G	F	G	E	Y	D	M	E	Y	D	D	.	.	.	.	.	.	.	.	.	.	.	V	E	P	E	I	V	I	S	I	.	.	.	.	G	G	D	G	T	F	L	S	A	F	H	Q	Y	E	E	R	L	D	E	I	A	F	I
Template Known Secondary structure											S															T	T	S	S					S	.	.	.	.	.	.	.	.	.	.	.	S	S		S						.	.	.	.		S											T	T	T	S	G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	T	A	H	D	Q	Y	A	V	Q	A	F	E	L	N	A	T	D	Y	I	L	K	P	F	G	Q	K	R	I	E	Q	A	V	N	K	V	R	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		G	I	H	T	.	.	.	.	.	.	.	.	.	.	.	G	H	L	G	F	Y	A	D	.	W	R	P	A	E	A	D	K	L	V	K	L	L	A	K
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	.	.	.	S	S			S	S			.			G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		66	.	.	.												70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions