Job Description P60611 Confidence 76.05% Date Tue Jul 17 17:05:12 BST 2012 Rank 143 Aligned Residues 107 % Identity 18% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	I	I	D	D	E	P	L	A	R	N	E	L	T	Y	L	L	N	E	I	G	G	F	E	E	I	N	E	A	E	N	V	K	E	T	L	E	A	L	L	I	N	Q	Y	D	I	I	F	L	D	V	N	L	M	D	E	N	G	I	E	L	G	A	K	I	Q	K	M	K	E	P	P	A	I	I	F	A	T
Query Conservation
Alig confidence																	.	.	.	.																																									.
Template Conservation																	.	.	.	.																																									.
Template Sequence		S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	.	.	.	.	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	N	D	D	S	T	N	.	F	F	I	S	M	N	A	R	Y	M	F	N	V	E	N	V	I	A	R	V
Template Known Secondary structure								S		G	G	G	G	G	G	S	.	.	.	.		T	T			S					S		T	T	S						T	T	T	G	G	G		S						S	S						.										T	S			S
Template Predicted Secondary structure																	.	.	.	.																																									.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	D	Q	Y	A	V	Q	A	F	E	L	N	A	T	D	Y	I	L	K	P	F	G	Q	K	R	I	E	Q	A	V	N	K	V	R	A
Query Conservation
Alig confidence																.					.		.	.
Template Conservation																.					.		.	.
Template Sequence		Y	D	P	E	K	I	K	I	F	E	E	N	G	I	.	K	T	I	C	.	P	.	.	A	V	L	M	I	E	K	V	K	E	F	I	I
Template Known Secondary structure		S	S	G	G	G						T	T	T		.					.		.	.
Template Predicted Secondary structure																.					.		.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.		.			.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions